RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ADAMTS20P59510 1910 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ASXL3Q9C0F0 2248 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 CPED1A4D0V7 1026 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SMIM24O75264 130 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 PGLSO95336 258 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 PRKCGP05129 697 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 CD48P09326 243 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 PNLIPP16233 465 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 GM2AP17900 193 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ATP6V1C1P21283 382 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 VIPR1P32241 457 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 EIF2S3P41091 472 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 MAGEA1P43355 309 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 LSSP48449 732 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 DRG2P55039 364 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 RPL26P61254 145 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SEMG2Q02383 582 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 GUCY2DQ02846 1103 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 DPTQ07507 201 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 KLC1Q07866 573 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TRAF2Q12933 501 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 C1orf61Q13536 156 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 LAMB3Q13751 1172 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ACOX1Q15067 660 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 CDKN3Q16667 212 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 DEFB133Q30KQ1 61 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 OXLD1Q5BKU9 147 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 WASHC2DQ5SRD0 308 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 LRRC38Q5VT99 294 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 NCBP2-AS2Q69YL0 99 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 IRGCQ6NXR0 463 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 OGFOD3Q6PK18 319 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 IGF2-ASQ6U949 168 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 EFL1Q7Z2Z2 1120 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SPATA21Q7Z572 469 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ARHGAP22Q7Z5H3 698 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 HID1Q8IV36 788 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 RHOT2Q8IXI1 618 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SLC35F3Q8IY50 421 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SYCE1Q8N0S2 351 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 AGGF1Q8N302 714 aaeCLIP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ARL10Q8N8L6 244 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 PLA2G15Q8NCC3 412 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 OR56A4Q8NGH8 313 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SLC35G2Q8TBE7 412 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 PIH1D2Q8WWB5 315 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 FGF11Q92914 225 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 GFM2Q969S9 779 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TSACCQ96A04 125 aaPredicted RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 FUBP1Q96AE4 644 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 NAF1Q96HR8 494 aaKnown RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF578Q96N58 590 aaPredicted RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 RNF157Q96PX1 679 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TMEM237Q96Q45 408 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SEMA3CQ99985 751 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TUBB6Q9BUF5 446 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 PACSIN1Q9BY11 444 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TEX101Q9BY14 249 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ROPN1BQ9BZX4 212 aaPredicted RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 LACRTQ9GZZ8 138 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 CAAP1Q9H8G2 361 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 ROPN1Q9HAT0 212 aaPredicted RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 RBM22Q9NW64 420 aaKnown RBP eCLIP7.99□□□□□ -1.131e-6■■■■■ 27.8
SCN1A-207ENST00000507401 B4GALT6Q9UBX8 382 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 KLQ9UEF7 1012 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TTC7AQ9ULT0 858 aaPredicted RBP7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TMCO1Q9UM00 188 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 OR1A2Q9Y585 309 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 RAI2Q9Y5P3 530 aa7.99□□□□□ -1.13
SCN1A-207ENST00000507401 TMEM202A6NGA9 273 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 A8MX80 341 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 TMX2-CTNND1H3BSU7 103 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 RRP8O43159 456 aaKnown RBP7.98□□□□□ -1.13
SCN1A-207ENST00000507401 PCCBP05166 539 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 PYGLP06737 847 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 MYF5P13349 255 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 CCNB1P14635 433 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ZFXP17010 805 aaPredicted RBP7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF30P17039 623 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 TGM2P21980 687 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 CA4P22748 312 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 HSD17B3P37058 310 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 SLC1A1P43005 524 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 CARSP49589 748 aaKnown RBP7.98□□□□□ -1.13
SCN1A-207ENST00000507401 SEC24CP53992 1094 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 CLDN6P56747 220 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 TAS2R40P59535 323 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ERVPABLB-1P60509 514 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 MAXP61244 160 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 MXRA7P84157 204 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ITKQ08881 620 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF844Q08AG5 666 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 PEX6Q13608 980 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ARHGEF7Q14155 803 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 MESDQ14696 234 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 CNGA3Q16281 694 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 GSTA3Q16772 222 aa7.98□□□□□ -1.13
SCN1A-207ENST00000507401 ISXQ2M1V0 245 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms