RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SLC45A3Q96JT2 553 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 CATSPER2Q96P56 530 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 TIMM29Q9BSF4 260 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 UCK1Q9HA47 277 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 BPIFA1Q9NP55 256 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 ASH1LQ9NR48 2969 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 ABHD10Q9NUJ1 306 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 UBP1Q9NZI7 540 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 ZNF624Q9P2J8 865 aaPredicted RBP11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 IL17BQ9UHF5 180 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 TMEM184BQ9Y519 407 aaPredicted RBP11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 SLC30A1Q9Y6M5 507 aa11.37□□□□□ -0.59
HMGCS1-204ENST00000507293 CAPN5O15484 640 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 CBFA2T2O43439 604 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 VEGFDO43915 354 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 MFAP3LO75121 409 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 UBXN7O94888 489 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 CDK14O94921 469 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 DLGAP3O95886 979 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 C9P02748 559 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 TPM1P09493 284 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 PRKAR1AP10644 381 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 BRAFP15056 766 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 AMD1P17707 334 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 XRCC1P18887 633 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 SLC19A1P41440 591 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 FOXM1Q08050 763 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 ABHD18Q0P651 414 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 NOMO1Q15155 1222 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 TEX44Q53QW1 395 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 MFSD7Q6UXD7 560 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 PTRH1Q86Y79 214 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 ZNF547Q8IVP9 402 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 RHOT1Q8IXI2 618 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 C9orf72Q96LT7 481 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 TEKT5Q96M29 485 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 CCDC42Q96M95 316 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 TGM7Q96PF1 710 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 VPS35Q96QK1 796 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 NHEJ1Q9H9Q4 299 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 POT1Q9NUX5 634 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 DDX56Q9NY93 547 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 SAE1Q9UBE0 346 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 TMPRSS11EQ9UL52 423 aa11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 FLNBO75369 2602 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-204ENST00000507293 TLN1Q9Y490 2541 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 PRR19A6NJB7 356 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 OR52A4PA6NMU1 304 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 SPOPO43791 374 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 PECAM1P16284 738 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 NFKB1P19838 968 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 COMTP21964 271 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 RPL10P27635 214 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 OAS2P29728 719 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 CD68P34810 354 aaPredicted RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 STAT5AP42229 794 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 CDKN2BP42772 138 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 SLC1A1P43005 524 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 CHRNA4P43681 627 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 LEPRP48357 1165 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 SEPHS1P49903 392 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 DRG2P55039 364 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 WNT3AP56704 352 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 WASHC5Q12768 1159 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 GTF2H3Q13889 308 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 TFDP2Q14188 446 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 MAP7Q14244 749 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 LLGL1Q15334 1064 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 ATP13A5Q4VNC0 1218 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 KAZNQ674X7 775 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 KDELC1Q6UW63 502 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 ABRAXAS1Q6UWZ7 409 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 TRAPPC5Q8IUR0 188 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 VSTM4Q8IW00 320 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 GDAP1Q8TB36 358 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 TFB1MQ8WVM0 346 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 STARD8Q92502 1023 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 RSC1A1Q92681 617 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 CXorf40BQ96DE9 158 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 ANP32EQ9BTT0 268 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 EFHD1Q9BUP0 239 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 TRIT1Q9H3H1 467 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 TRIM10Q9UDY6 481 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 FAM153AQ9UHL3 310 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 TUBD1Q9UJT1 453 aa11.35□□□□□ -0.59
HMGCS1-204ENST00000507293 F5H423 210 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 ARHGAP6O43182 974 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 CST8O60676 142 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 RASSF9O75901 435 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 ZNF28P17035 718 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 VCLP18206 1134 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 IDSP22304 550 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 HMGCLP35914 325 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 CAPZBP47756 277 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 SH3BP2P78314 561 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 TLE1Q04724 770 aa11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 TMEM115Q12893 351 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-204ENST00000507293 GPR18Q14330 331 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms