RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.11
SCLT1-208ENST00000506368 NUSAP1Q9BXS6 441 aaKnown RBP15.77■□□□□ 0.11
SCLT1-208ENST00000506368 BRINP2Q9C0B6 783 aa15.77■□□□□ 0.11
SCLT1-208ENST00000506368 NOL6Q9H6R4 1146 aaKnown RBP15.77■□□□□ 0.11
SCLT1-208ENST00000506368 GORASP2Q9H8Y8 452 aa15.77■□□□□ 0.11
SCLT1-208ENST00000506368 AIG1Q9NVV5 245 aa15.77■□□□□ 0.11
SCLT1-208ENST00000506368 ERVW-1Q9UQF0 538 aa15.77■□□□□ 0.11
SCLT1-208ENST00000506368 ORC6Q9Y5N6 252 aa15.77■□□□□ 0.11
SCLT1-208ENST00000506368 FAM92AA1XBS5 289 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 M0QYT0 321 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 TOR1BO14657 336 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 PIP5K1BO14986 540 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 SNX4O95219 450 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 WISP3O95389 354 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-208ENST00000506368 ITGAMP11215 1152 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 HGFP14210 728 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 TRPC1P48995 793 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 MEP1AQ16819 746 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 GEN1Q17RS7 908 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-208ENST00000506368 SULT1C3Q6IMI6 304 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 CDR2LQ86X02 465 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-208ENST00000506368 CHST13Q8NET6 341 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 GIPC2Q8TF65 315 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 MBOAT4Q96T53 435 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 KAT8Q9H7Z6 458 aaKnown RBP15.76■□□□□ 0.11
SCLT1-208ENST00000506368 MARCH7Q9H992 704 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 SCN3BQ9NY72 215 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 CRNNQ9UBG3 495 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-208ENST00000506368 AP3M1Q9Y2T2 418 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
SCLT1-208ENST00000506368 GOLGA8CPA6NN73 597 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 RAD51BO15315 384 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 NCK1P16333 377 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 RABL3Q5HYI8 236 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 KIAA0319Q5VV43 1072 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 KIAA1841Q6NSI8 718 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ZNF544Q6NX49 715 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ESRP1Q6NXG1 681 aaKnown RBP15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PNCKQ6P2M8 343 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PLD3Q8IV08 490 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 OR6B3Q8NGW1 331 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PSMA8Q8TAA3 256 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 NDNFQ8TB73 568 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ISG20Q96AZ6 181 aaKnown RBP15.75■□□□□ 0.11
SCLT1-208ENST00000506368 FAM149B1Q96BN6 582 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 DUSP21Q9H596 190 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 LCTP09848 1927 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 FAM234BA2RU67 622 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ZBTB42B2RXF5 422 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PRKD3O94806 890 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 CDK14O94921 469 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ALX3O95076 343 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 DLGAP3O95886 979 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 CYBBP04839 570 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ARSAP15289 507 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 SREBF2Q12772 1141 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 CTU2Q2VPK5 515 aaKnown RBP15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ZNF404Q494X3 552 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 USP43Q70EL4 1123 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ADHFE1Q8IWW8 467 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PEX5LQ8IYB4 626 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 EID3Q8N140 333 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 POC5Q8NA72 575 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 MCFD2Q8NI22 146 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 RHEBL1Q8TAI7 183 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 KCTD13Q8WZ19 329 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PROX1Q92786 737 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 BHMTQ93088 406 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 BTBD2Q9BX70 525 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 POLG2Q9UHN1 485 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 ZNF221Q9UK13 617 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 SATB2Q9UPW6 733 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 PMF1-BGLAPU3KQ54 211 aa15.75■□□□□ 0.11
SCLT1-208ENST00000506368 SLC22A3O75751 556 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 FKBP9O95302 570 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 APOA1P02647 267 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 CHRNB1P11230 501 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 GGT1P19440 569 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 NR4A1P22736 598 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 CCNCP24863 283 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 SH3BP2P78314 561 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 CLCQ05315 142 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PRKCDQ05655 676 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 KCNAB2Q13303 367 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 KCTD2Q14681 263 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PYCR3Q53H96 274 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 HECTD2Q5U5R9 776 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 RSBN1Q5VWQ0 802 aaPredicted RBP15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PAGE2Q7Z2X7 111 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 ISCA2Q86U28 154 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 ASCC1Q8N9N2 400 aaKnown RBP15.74■□□□□ 0.11
SCLT1-208ENST00000506368 OR5K1Q8NHB7 308 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 ANGPTL6Q8NI99 470 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 GRPEL2Q8TAA5 225 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 PGAP3Q96FM1 320 aaPredicted RBP15.74■□□□□ 0.11
SCLT1-208ENST00000506368 KIF12Q96FN5 646 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 AMBRA1Q9C0C7 1298 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 CEP44Q9C0F1 390 aa15.74■□□□□ 0.11
SCLT1-208ENST00000506368 CCDC90BQ9GZT6 254 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms