RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 SPATA22Q8NHS9 363 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 C9orf43Q8TAL5 461 aaPredicted RBP11.2□□□□□ -0.62
SIL1-208ENST00000505945 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.2□□□□□ -0.62
SIL1-208ENST00000505945 APOBEC4Q8WW27 367 aaKnown RBP11.2□□□□□ -0.62
SIL1-208ENST00000505945 STARD8Q92502 1023 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 ABHD17AQ96GS6 310 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 ELMO2Q96JJ3 720 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 MAK16Q9BXY0 300 aaKnown RBP11.2□□□□□ -0.62
SIL1-208ENST00000505945 GPR63Q9BZJ6 419 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 ULBP3Q9BZM4 244 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 UCK1Q9HA47 277 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 TRIM10Q9UDY6 481 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 ZNF711Q9Y462 761 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 RPS6KL1Q9Y6S9 549 aa11.2□□□□□ -0.62
SIL1-208ENST00000505945 OR52A4PA6NMU1 304 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 GPR89AB7ZAQ6 455 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 GOLGA6L19H0YKK7 550 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 APOL1O14791 398 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 AURKAO14965 403 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 KMOO15229 486 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 KIF1CO43896 1103 aaKnown RBP11.19□□□□□ -0.62
SIL1-208ENST00000505945 VEGFDO43915 354 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 PMPCBO75439 489 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 RASSF9O75901 435 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 CDK14O94921 469 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 MT-CYBP00156 380 aaPredicted RBP11.19□□□□□ -0.62
SIL1-208ENST00000505945 GPR89BP0CG08 455 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 BRAFP15056 766 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 BPIP17213 487 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 DRG2P55039 364 aaKnown RBP11.19□□□□□ -0.62
SIL1-208ENST00000505945 MC1RQ01726 317 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 PDK1Q15118 436 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 ASTE1Q2TB18 679 aaPredicted RBP11.19□□□□□ -0.62
SIL1-208ENST00000505945 ABRAXAS1Q6UWZ7 409 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 ZNF547Q8IVP9 402 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 ESX1Q8N693 406 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 GALNT6Q8NCL4 622 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 SLC35G2Q8TBE7 412 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
SIL1-208ENST00000505945 TADA1Q96BN2 335 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 OR6C1Q96RD1 312 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 SLC25A51Q9H1U9 297 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 BPIFA1Q9NP55 256 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 SLC40A1Q9NP59 571 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 RAD18Q9NS91 495 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 UBP1Q9NZI7 540 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 NFKBIL1Q9UBC1 381 aaPredicted RBP11.19□□□□□ -0.62
SIL1-208ENST00000505945 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 ANAPC2Q9UJX6 822 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 TMPRSS11EQ9UL52 423 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 SPO11Q9Y5K1 396 aa11.19□□□□□ -0.62
SIL1-208ENST00000505945 PRR19A6NJB7 356 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 ZNF487B1APH4 448 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
SIL1-208ENST00000505945 NDST3O95803 873 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 TMEM253P0C7T8 217 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 IDSP22304 550 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 DLSTP36957 453 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 CASRP41180 1078 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 DYNLT1P63172 113 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 MAP7Q14244 749 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 GPR18Q14330 331 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 ATP13A5Q4VNC0 1218 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 PDPK2PQ6A1A2 396 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 CCDC70Q6NSX1 233 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 C6orf15Q6UXA7 325 aaPredicted RBP11.18□□□□□ -0.62
SIL1-208ENST00000505945 RFX6Q8HWS3 928 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 RASGRP3Q8IV61 690 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 OR8K1Q8NGG5 319 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 RSC1A1Q92681 617 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 OLFM3Q96PB7 478 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 TIMM29Q9BSF4 260 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 XPO4Q9C0E2 1151 aaKnown RBP11.18□□□□□ -0.62
SIL1-208ENST00000505945 DEF6Q9H4E7 631 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 GLOD4Q9HC38 313 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 CROTQ9UKG9 612 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 WDR37Q9Y2I8 494 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.18□□□□□ -0.621e-8■■□□□ 13.8
SIL1-208ENST00000505945 KCNMB2Q9Y691 235 aa11.18□□□□□ -0.62
SIL1-208ENST00000505945 RELNP78509 3460 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 TOX3O15405 576 aaPredicted RBP11.17□□□□□ -0.62
SIL1-208ENST00000505945 AKR1B10O60218 316 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 KATNA1O75449 491 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 KIAA0754O94854 1291 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 NDUFA10O95299 355 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 KRT1P04264 644 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 FURINP09958 794 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 TNNT1P13805 278 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 ZFXP17010 805 aaPredicted RBP11.17□□□□□ -0.62
SIL1-208ENST00000505945 FOXK1P85037 733 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
SIL1-208ENST00000505945 TMEM115Q12893 351 aaPredicted RBP11.17□□□□□ -0.62
SIL1-208ENST00000505945 SEPT6Q14141 434 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 ERV3-1Q14264 604 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 IL11RAQ14626 422 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 NOMO1Q15155 1222 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 CRTC2Q53ET0 693 aaPredicted RBP11.17□□□□□ -0.62
SIL1-208ENST00000505945 TEX44Q53QW1 395 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 AGAP9Q5VTM2 703 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms