RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
DDX41-204ENST00000504807 CNGA4Q8IV77 575 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 BMPERQ8N8U9 685 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 MRGPRX2Q96LB1 330 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 TBC1D10AQ9BXI6 508 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 ADGRE3Q9BY15 652 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 RBSNQ9H1K0 784 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
DDX41-204ENST00000504807 MAGEE1Q9HCI5 957 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 ZNF71Q9NQZ8 489 aaPredicted RBP12.97□□□□□ -0.33
DDX41-204ENST00000504807 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
DDX41-204ENST00000504807 PKD2L2Q9NZM6 624 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 PCDHA13Q9Y5I0 950 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 CRYBG3Q68DQ2 2970 aa12.97□□□□□ -0.33
DDX41-204ENST00000504807 A0A0A6YYK5 440 aaPredicted RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 CHUKO15111 745 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 GRID2O43424 1007 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 NDST3O95803 873 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 BRAFP15056 766 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 CA4P22748 312 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 COL8A1P27658 744 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 POLE2P56282 527 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 WNT3AP56704 352 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 DCDC1P59894 354 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 UBE2IP63279 158 aaKnown RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 LRP8Q14114 963 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 ATP13A5Q4VNC0 1218 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 RAD9BQ6WBX8 426 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 ATCAYQ86WG3 371 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 SRRM1Q8IYB3 904 aaKnown RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 KATNAL2Q8IYT4 538 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 SLC25A41Q8N5S1 370 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 OR4D9Q8NGE8 314 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 GLYATL1Q969I3 302 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 MIB2Q96AX9 1013 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX41-204ENST00000504807 PLEKHG4BQ96PX9 1271 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 CMKLR1Q99788 373 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 HEMGNQ9BXL5 484 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 MAK16Q9BXY0 300 aaKnown RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 CARD9Q9H257 536 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 KLC4Q9NSK0 619 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 PDP2Q9P2J9 529 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 NFKBIL1Q9UBC1 381 aaPredicted RBP12.96□□□□□ -0.33
DDX41-204ENST00000504807 DNPEPQ9ULA0 475 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 B3GALT1Q9Y5Z6 326 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 OTOGQ6ZRI0 2925 aa12.96□□□□□ -0.33
DDX41-204ENST00000504807 RGSL1A5PLK6 1076 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 A8MU76 341 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 TMX2-CTNND1H3BSU7 103 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 MTSS1O43312 755 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 PYGLP06737 847 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 ZFXP17010 805 aaPredicted RBP12.95□□□□□ -0.34
DDX41-204ENST00000504807 FECHP22830 423 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 GFERP55789 205 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 HHEXQ03014 270 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 SLC14A2Q15849 920 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 ZNF569Q5MCW4 686 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 BORAQ6PGQ7 559 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 GAS2L3Q86XJ1 694 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 TRAM1L1Q8N609 369 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 CCHCR1Q8TD31 782 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 TFB1MQ8WVM0 346 aaKnown RBP12.95□□□□□ -0.34
DDX41-204ENST00000504807 ART4Q93070 314 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 CTRCQ99895 268 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 TRIM5Q9C035 493 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 LACRTQ9GZZ8 138 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 TRIM39Q9HCM9 518 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 APMAPQ9HDC9 416 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
DDX41-204ENST00000504807 IL26Q9NPH9 171 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 ZNF624Q9P2J8 865 aaPredicted RBP12.95□□□□□ -0.34
DDX41-204ENST00000504807 DNAJC16Q9Y2G8 782 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 WDR37Q9Y2I8 494 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 SLC30A1Q9Y6M5 507 aa12.95□□□□□ -0.34
DDX41-204ENST00000504807 HGSO14964 777 aaPredicted RBP12.94□□□□□ -0.34
DDX41-204ENST00000504807 UGT1A9O60656 530 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 SLC25A14O95258 325 aaPredicted RBP12.94□□□□□ -0.34
DDX41-204ENST00000504807 AGTP01019 485 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 TPM1P09493 284 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 F3P13726 295 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 UGT1A6P19224 532 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 UGT1A1P22309 533 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 UGT1A4P22310 534 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 RBL1P28749 1068 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 UGT1A3P35503 534 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 SLC19A1P41440 591 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 UQCRFS1P47985 274 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 ZNF75DP51815 510 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 SEPT7Q16181 437 aaKnown RBP12.94□□□□□ -0.34
DDX41-204ENST00000504807 TFDP3Q5H9I0 405 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 SNAP47Q5SQN1 464 aa12.94□□□□□ -0.34
DDX41-204ENST00000504807 ANKS6Q68DC2 871 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms