RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 LRRTM4Q86VH4 590 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 PIANPQ8IYJ0 282 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 RASGEF1AQ8N9B8 481 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 FBXO25Q8TCJ0 367 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 RHBDD1Q8TEB9 315 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 ZNF514Q96K75 400 aaPredicted RBP17.97■□□□□ 0.47
DDR1-254ENST00000504679 OR2M4Q96R27 311 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 LRRC61Q9BV99 259 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 FAM129AQ9BZQ8 928 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 CDV3Q9UKY7 258 aaKnown RBP17.97■□□□□ 0.47
DDR1-254ENST00000504679 TEX264Q9Y6I9 313 aa17.97■□□□□ 0.47
DDR1-254ENST00000504679 DNMT3AQ9Y6K1 912 aaPredicted RBP17.97■□□□□ 0.47
DDR1-254ENST00000504679 PLXNB3Q9ULL4 1909 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 ESYT3A0FGR9 886 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 E7ESA3 106 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 LMO7DNF2Z398 122 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 TPP1O14773 563 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 SLC30A4O14863 429 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 PFDN6O15212 129 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 YY2O15391 372 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 BANF1O75531 89 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 PRSS56P0CW18 603 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 ATP1B2P14415 290 aaPredicted RBP17.96■□□□□ 0.47
DDR1-254ENST00000504679 PMLP29590 882 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 TTPAP49638 278 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 TUBB4BP68371 445 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 ILF3Q12906 894 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDR1-254ENST00000504679 THOC5Q13769 683 aaKnown RBP17.96■□□□□ 0.47
DDR1-254ENST00000504679 ITIH4Q14624 930 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 SPANXN3Q5MJ09 141 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 TMEM220Q6QAJ8 160 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 CHST15Q7LFX5 561 aaPredicted RBP17.96■□□□□ 0.47
DDR1-254ENST00000504679 EID2Q8N6I1 236 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 OTUD6BQ8N6M0 293 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
DDR1-254ENST00000504679 GPBAR1Q8TDU6 330 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 IFT81Q8WYA0 676 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 DUSP23Q9BVJ7 150 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 GSDMCQ9BYG8 508 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 CLPBQ9H078 707 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 CAAP1Q9H8G2 361 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 ZC3H7BQ9UGR2 993 aaKnown RBP17.96■□□□□ 0.47
DDR1-254ENST00000504679 PRKAB1Q9Y478 270 aa17.96■□□□□ 0.47
DDR1-254ENST00000504679 ZCWPW2A0A1B0GU75 182 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 BHMG1C9JSJ3 638 aaPredicted RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 SH3BP5O60239 455 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 KCNJ13O60928 360 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 NSG1P42857 185 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 ARCN1P48444 511 aaKnown RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 CTBSQ01459 385 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 LRP8Q14114 963 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 DBN1Q16643 649 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 RSPO4Q2I0M5 234 aaPredicted RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 NEPROQ6NW34 567 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 ZDHHC24Q6UX98 284 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 TRAPPC5Q8IUR0 188 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 ANKMY2Q8IV38 441 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 IGDCC3Q8IVU1 814 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 NAXDQ8IW45 347 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 PALM2Q8IXS6 379 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 IFT20Q8IY31 132 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 ZBED8Q8IZ13 594 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 GABPB2Q8TAK5 448 aaPredicted RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 PYROXD1Q8WU10 500 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 SGF29Q96ES7 293 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 TCF12Q99081 682 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 TRIM56Q9BRZ2 755 aaKnown RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 SLC32A1Q9H598 525 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 C20orf96Q9NUD7 363 aaPredicted RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 NLGN3Q9NZ94 848 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 MTRF1LQ9UGC7 380 aaKnown RBP17.95■□□□□ 0.46
DDR1-254ENST00000504679 CHMP2BQ9UQN3 213 aa17.95■□□□□ 0.46
DDR1-254ENST00000504679 LRP4O75096 1905 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 ASCC3Q8N3C0 2202 aaKnown RBP17.94■□□□□ 0.46
DDR1-254ENST00000504679 IGLV3-16A0A075B6K0 115 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 F8W8V4 182 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 FFAR2O15552 330 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 NDUFS3O75489 264 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 RHOXF2BP0C7M4 288 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 ZNF7P17097 686 aaPredicted RBP17.94■□□□□ 0.46
DDR1-254ENST00000504679 VCLP18206 1134 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
DDR1-254ENST00000504679 TCEA2Q15560 299 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 CRTC3Q6UUV7 619 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 CEP128Q6ZU80 1094 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 DET1Q7L5Y6 550 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 LMNTD2Q8IXW0 634 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 FBXO36Q8NEA4 188 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 FAM46DQ8NEK8 389 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 GPR150Q8NGU9 434 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 CALML6Q8TD86 181 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 CFAP36Q96G28 342 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 RHOXF2Q9BQY4 288 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 PHACTR1Q9C0D0 580 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 TSPYL1Q9H0U9 437 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 SAYSD1Q9NPB0 183 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 PLEKHM1Q9Y4G2 1056 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 GVINP1Q7Z2Y8 2422 aa17.94■□□□□ 0.46
DDR1-254ENST00000504679 OR2AG2A6NM03 316 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms