RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 KELP23276 732 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 CTSCP53634 463 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 CBLBQ13191 982 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 CTBP1Q13363 440 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 THOC5Q13769 683 aaKnown RBP13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 GPR33Q49SQ1 333 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 LDLRAP1Q5SW96 308 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 NEPROQ6NW34 567 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 KCNMB4Q86W47 210 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 DENND6AQ8IWF6 608 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 DDHD1Q8NEL9 900 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 CCL4L1Q8NHW4 92 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 ULK4Q96C45 1275 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 SGF29Q96ES7 293 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 COPS8Q99627 209 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 EDEM2Q9BV94 578 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 FOXP3Q9BZS1 431 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 UCKL1Q9NWZ5 548 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 A0A1B0GTQ1 180 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 OR2AG2A6NM03 316 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CDX4O14627 284 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 TTC4O95801 387 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CSF2P04141 144 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 IVLP07476 585 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 PBLDP30039 288 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 HK3P52790 923 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 VSNL1P62760 191 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 MPP1Q00013 466 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 KYNUQ16719 465 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 UAP1L1Q3KQV9 507 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 PYCR3Q53H96 274 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 ZNF789Q5FWF6 425 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 ARMC3Q5W041 872 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CCNI2Q6ZMN8 369 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CLDN19Q8N6F1 224 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 BEND7Q8N7W2 519 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 LMX1AQ8TE12 382 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CERS2Q96G23 380 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 DCUN1D1Q96GG9 259 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 SGSM3Q96HU1 749 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CNTNAP3BQ96NU0 1288 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 CNTNAP3Q9BZ76 1288 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 ZDHHC5Q9C0B5 715 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 TMEM168Q9H0V1 697 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 ERVMER34-1Q9H9K5 563 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 LRRC4CQ9HCJ2 640 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 PPANQ9NQ55 473 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 FBXO6Q9NRD1 293 aaPredicted RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 SMYD2Q9NRG4 433 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 SLC23A2Q9UGH3 650 aa13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 APOBEC3BQ9UH17 382 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-212ENST00000504380 TNFRSF10CO14798 259 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 GRID2O43424 1007 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 SGTAO43765 313 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 VEGFDO43915 354 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 NUAK1O60285 661 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 LRP3O75074 770 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 PIAS2O75928 621 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 CER1O95813 267 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 ACP5P13686 325 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 NME1P15531 152 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 AK4P27144 223 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 PMLP29590 882 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 SLC1A2P43004 574 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 ABCG1P45844 678 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 PRRT3Q5FWE3 981 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 IL27RAQ6UWB1 636 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 C3orf62Q6ZUJ4 267 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 GALNT13Q8IUC8 556 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 TRAPPC5Q8IUR0 188 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 ZNF547Q8IVP9 402 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 GPR161Q8N6U8 529 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 GPR150Q8NGU9 434 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 UHMK1Q8TAS1 419 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 GSDMBQ8TAX9 411 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 SCARF2Q96GP6 870 aaPredicted RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 OR2M4Q96R27 311 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 LRRC61Q9BV99 259 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 FAM129AQ9BZQ8 928 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 SLC13A1Q9BZW2 595 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 CLPBQ9H078 707 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 VPS37BQ9H9H4 285 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 VPS18Q9P253 973 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 FAM8A1Q9UBU6 413 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms