RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 LYSMD3Q7Z3D4 306 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SAMD14Q8IZD0 417 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC47Q8N1G4 583 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PQLC3Q8N755 202 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZFPM2Q8WW38 1151 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PYDC1Q8WXC3 89 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SGK3Q96BR1 496 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 VPS35Q96QK1 796 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PELOQ9BRX2 385 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PCDHAC1Q9H158 963 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PSTPIP2Q9H939 334 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 KCNK13Q9HB14 408 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 INIPQ9NRY2 104 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SCN3BQ9NY72 215 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GULP1Q9UBP9 304 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRPS1Q9UHF7 1281 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RIMS3Q9UJD0 308 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PLA2G4CQ9UP65 541 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 COG5Q9UP83 839 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PCDHB3Q9Y5E6 796 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ORC6Q9Y5N6 252 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HSPE1-MOB4S4R3N1 261 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 A0A1W2PRG6 482 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FAM159BA6NKW6 160 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CXorf49A8MYA2 514 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PRR5-ARHGAP8B1AHC4 643 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ATP5J2-PTCD1G3V325 749 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM24O15164 1050 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SHOXO15266 292 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SPINT1O43278 529 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GAS7O60861 476 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PTCD1O75127 700 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TSC22D2O75157 780 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DDHD2O94830 711 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CPNE6O95741 557 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PRKCAP17252 672 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CTRB1P17538 263 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GABRA4P48169 554 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PSMD4P55036 377 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SOX8P57073 446 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CTAG1AP78358 180 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ARHGAP8P85298 464 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RIN1Q13671 783 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LAMC2Q13753 1193 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MXD4Q14582 209 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NPTX1Q15818 432 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 BICRALQ6AI39 1079 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CTRB2Q6GPI1 263 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ELP2Q6IA86 826 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SPATC1Q76KD6 591 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PRSS48Q7RTY5 328 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TMC8Q8IU68 726 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MICU2Q8IYU8 434 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CYP4X1Q8N118 509 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PELI3Q8N2H9 469 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM86AQ8N2M4 240 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DPP10Q8N608 796 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 C1orf127Q8N9H9 656 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LRRC20Q8TCA0 184 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 BBS4Q96RK4 519 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HOPXQ9BPY8 73 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ACAT2Q9BWD1 397 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF717Q9BY31 904 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 KAT8Q9H7Z6 458 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ATP13A2Q9NQ11 1180 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PAK1IP1Q9NWT1 392 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PPP1R14DQ9NXH3 145 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MPP6Q9NZW5 540 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ENOPH1Q9UHY7 261 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 KLHL21Q9UJP4 597 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 IVNS1ABPQ9Y6Y0 642 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CHD8Q9HCK8 2581 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FAAHO00519 579 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SNAPINO95295 136 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PIGNO95427 931 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PAHP00439 452 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TNNC2P02585 160 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 COX4I1P13073 169 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TCN1P20061 433 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CASP1P29466 404 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 LEPRP48357 1165 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PPP3CCP48454 512 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 YWHAGP61981 247 aaKnown RBP eCLIP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FOXM1Q08050 763 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TRAF2Q12933 501 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 UGT3A2Q3SY77 523 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TIGD2Q4W5G0 525 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 DCAF17Q5H9S7 520 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RTP2Q5QGT7 225 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TIGD3Q6B0B8 471 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 KDELC1Q6UW63 502 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MSANTD1Q6ZTZ1 278 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ERMP1Q7Z2K6 904 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TRPV3Q8NET8 790 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 OR5T2Q8NGG2 359 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SNX19Q92543 992 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TFAP2CQ92754 450 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ROPN1LQ96C74 230 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms