RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PPM1JQ5JR12 505 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 CHST15Q7LFX5 561 aaPredicted RBP24.78■■□□□ 1.56
LSM6-202ENST00000502781 TMEM135Q86UB9 458 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 OR4L1Q8NH43 312 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 HEXDCQ8WVB3 486 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 CCDC97Q96F63 343 aaPredicted RBP24.78■■□□□ 1.56
LSM6-202ENST00000502781 TTC25Q96NG3 672 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 COPS8Q99627 209 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 TIMM29Q9BSF4 260 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 TAAR2Q9P1P5 351 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 GPR34Q9UPC5 381 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 DOLKQ9UPQ8 538 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 SNX24Q9Y343 169 aa24.78■■□□□ 1.56
LSM6-202ENST00000502781 SPAARA0A1B0GVQ0 90 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 KMOO15229 486 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 SGTAO43765 313 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 DKK1O94907 266 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 CKMT1AP12532 417 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 CKMT2P17540 419 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 MSH3P20585 1137 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 SIM1P81133 766 aaPredicted RBP24.77■■□□□ 1.56
LSM6-202ENST00000502781 GTF2H3Q13889 308 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 DBN1Q16643 649 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 FNBP1LQ5T0N5 605 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 DGLUCYQ7Z3D6 616 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 SLC35F3Q8IY50 421 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 ZNF514Q96K75 400 aaPredicted RBP24.77■■□□□ 1.56
LSM6-202ENST00000502781 SPATS2LQ9NUQ6 558 aaKnown RBP24.77■■□□□ 1.56
LSM6-202ENST00000502781 NCKIPSDQ9NZQ3 722 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 WHRNQ9P202 907 aa24.77■■□□□ 1.56
LSM6-202ENST00000502781 NDC80O14777 642 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 ACP5P13686 325 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 AKT1P31749 480 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 ACTR1BP42025 376 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 ACTR1AP61163 376 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 CBLBQ13191 982 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 ITIH4Q14624 930 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 MSS51Q4VC12 460 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 KIAA0930Q6ICG6 404 aaPredicted RBP24.76■■□□□ 1.55
LSM6-202ENST00000502781 CRTC3Q6UUV7 619 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 CES3Q6UWW8 571 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 TAS2R42Q7RTR8 314 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 C17orf82Q86X59 251 aaPredicted RBP24.76■■□□□ 1.55
LSM6-202ENST00000502781 MMGT1Q8N4V1 131 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 BBOF1Q8ND07 529 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 MNS1Q8NEH6 495 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 FAM46DQ8NEK8 389 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 GPR156Q8NFN8 814 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 OR6P1Q8NGX9 317 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 TRIM56Q9BRZ2 755 aaKnown RBP24.76■■□□□ 1.55
LSM6-202ENST00000502781 SAMD15Q9P1V8 674 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 SLC23A2Q9UGH3 650 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 ANAPC5Q9UJX4 755 aa24.76■■□□□ 1.55
LSM6-202ENST00000502781 DNMT3AQ9Y6K1 912 aaPredicted RBP24.76■■□□□ 1.55
LSM6-202ENST00000502781 NOBOXO60393 691 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 ZNF7P17097 686 aaPredicted RBP24.75■■□□□ 1.55
LSM6-202ENST00000502781 ACP1P24666 158 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 ARCN1P48444 511 aaKnown RBP24.75■■□□□ 1.55
LSM6-202ENST00000502781 ACADVLP49748 655 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 DNAJC3Q13217 504 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 ANKRD20A4Q4UJ75 823 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 CASC4Q6P4E1 433 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 SLC30A9Q6PML9 568 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 CERS6Q6ZMG9 384 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 TRAPPC5Q8IUR0 188 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 ARL10Q8N8L6 244 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 FCRL3Q96P31 734 aaPredicted RBP24.75■■□□□ 1.55
LSM6-202ENST00000502781 GRHL1Q9NZI5 618 aa24.75■■□□□ 1.55
LSM6-202ENST00000502781 ARHGEF17Q96PE2 2063 aaPredicted RBP24.75■■□□□ 1.55
LSM6-202ENST00000502781 ZCWPW2A0A1B0GU75 182 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 OR2AG2A6NM03 316 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 CFAP99D6REC4 459 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 RALBP11234 206 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 DHX9Q08211 1270 aaKnown RBP24.74■■□□□ 1.55
LSM6-202ENST00000502781 SEMA3AQ14563 771 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 BCL7AQ4VC05 210 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 DNAJC21Q5F1R6 531 aaKnown RBP24.74■■□□□ 1.55
LSM6-202ENST00000502781 TMEM220Q6QAJ8 160 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 PACS1Q6VY07 963 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 SLCO6A1Q86UG4 719 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 SFTPA2Q8IWL1 248 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 PDIK1LQ8N165 341 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 KYQ8NBH2 561 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 GLMNQ92990 594 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.74■■□□□ 1.55
LSM6-202ENST00000502781 SGF29Q96ES7 293 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 LINC00615Q96LM1 132 aaPredicted RBP24.74■■□□□ 1.55
LSM6-202ENST00000502781 RAB17Q9H0T7 212 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 DPH5Q9H2P9 285 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 DPEP2Q9H4A9 486 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 MARCH4Q9P2E8 410 aaPredicted RBP24.74■■□□□ 1.55
LSM6-202ENST00000502781 KCNK6Q9Y257 313 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 UTP11Q9Y3A2 253 aaKnown RBP24.74■■□□□ 1.55
LSM6-202ENST00000502781 PCDHGA1Q9Y5H4 931 aa24.74■■□□□ 1.55
LSM6-202ENST00000502781 CTAGE15A4D2H0 777 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 EME2A4GXA9 379 aaPredicted RBP24.73■■□□□ 1.55
LSM6-202ENST00000502781 A6NCN8 305 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 KCNJ13O60928 360 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 USP1O94782 785 aa24.73■■□□□ 1.55
LSM6-202ENST00000502781 VAPBO95292 243 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms