RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CAMK1GQ96NX5 476 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 TTC1Q99614 292 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 COPS8Q99627 209 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 WASF3Q9UPY6 502 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 KCTD3Q9Y597 815 aa10.59□□□□□ -0.71
UBE2D3-212ENST00000502563 TDRD6O60522 2096 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 KIR2DS5A0A0G2JLQ3 304 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 A0A0G2JNG1 304 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TCRBV7S3A2A0A539 114 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 SDR42E2A6NKP2 422 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 KIR2DS3K7RE56 304 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ZW10O43264 779 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 NOBOXO60393 691 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TCEA3O75764 348 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 USP1O94782 785 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 SEC31AO94979 1220 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ASMTLO95671 621 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TTC4O95801 387 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 GLB1P16278 677 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TPH1P17752 444 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 PAMP19021 973 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 NSG1P42857 185 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 GPR3P46089 330 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 GNPDA1P46926 289 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 POLD2P49005 469 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 PRLHRP49683 370 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 PLOD1Q02809 727 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 FRG1Q14331 258 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 KIR2DS5Q14953 304 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 NR0B2Q15466 257 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TRIP13Q15645 432 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 SMAD1Q15797 465 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 DEFB133Q30KQ1 61 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 C14orf28Q4W4Y0 310 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ANKRD22Q5VYY1 191 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 HIBCHQ6NVY1 386 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ABRAXAS1Q6UWZ7 409 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TAF8Q7Z7C8 310 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TRIM74Q86UV6 250 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 SLC35F3Q8IY50 421 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 GALNT15Q8N3T1 639 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 SFRP1Q8N474 314 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 GPR150Q8NGU9 434 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 OR4L1Q8NH43 312 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 KIF18AQ8NI77 898 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 SEC14L1Q92503 715 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TCF12Q99081 682 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 FAM129AQ9BZQ8 928 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 OR2AG1Q9H205 316 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 VPS37BQ9H9H4 285 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 UCK1Q9HA47 277 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TAAR2Q9P1P5 351 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 WHRNQ9P202 907 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ASIC3Q9UHC3 531 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 CRLS1Q9UJA2 301 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 TMEM98Q9Y2Y6 226 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ST14Q9Y5Y6 855 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 MRFAP1Q9Y605 127 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 GOLGA4Q13439 2230 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 MYLKQ15746 1914 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 BPTFQ12830 3046 aa10.58□□□□□ -0.72
UBE2D3-212ENST00000502563 ZFC3H1O60293 1989 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 GOLGA8CPA6NN73 597 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 GIPC1O14908 333 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 TP73O15350 636 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 FFAR2O15552 330 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 BUD23O43709 281 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 UGT1A9O60656 530 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 F3P13726 295 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 ATP1B2P14415 290 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 ZNF7P17097 686 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 UGT1A6P19224 532 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 MSH3P20585 1137 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 UGT1A1P22309 533 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 UGT1A4P22310 534 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 UGT1A3P35503 534 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 UGT1A5P35504 534 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 ACTR1BP42025 376 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 TTPAP49638 278 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 VPS41P49754 854 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 ARSDP51689 593 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 ACTR1AP61163 376 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 PRAMEP78395 509 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 B4GALNT1Q00973 533 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 RPA4Q13156 261 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 SQSTM1Q13501 440 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 C1orf61Q13536 156 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 SEPT6Q14141 434 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 PTPRCAPQ14761 206 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 ZNF658BQ4V348 819 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 KHDC1Q4VXA5 237 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 DNAJC21Q5F1R6 531 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 RNF187Q5TA31 235 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 N4BP2L1Q5TBK1 243 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 IYDQ6PHW0 289 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 RD3Q7Z3Z2 195 aa10.57□□□□□ -0.72
UBE2D3-212ENST00000502563 GALNT7Q86SF2 657 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms