RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 DCUN1D1Q96GG9 259 aa16.54■□□□□ 0.24
PRKCB-210ENST00000498739 COPS8Q99627 209 aa16.54■□□□□ 0.24
PRKCB-210ENST00000498739 TRIM31Q9BZY9 425 aa16.54■□□□□ 0.24
PRKCB-210ENST00000498739 KLC4Q9NSK0 619 aa16.54■□□□□ 0.24
PRKCB-210ENST00000498739 CDC23Q9UJX2 597 aa16.54■□□□□ 0.24
PRKCB-210ENST00000498739 PADI4Q9UM07 663 aa16.54■□□□□ 0.24
PRKCB-210ENST00000498739 TRBV5-4A0A0C4DH59 114 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 MED19A0JLT2 244 aaPredicted RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 NOBOXO60393 691 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 GOT2P00505 430 aaKnown RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 RALBP11234 206 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 ZNF7P17097 686 aaPredicted RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 ACRV1P26436 265 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 NMBRP28336 390 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 FOXN2P32314 431 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 CTSCP53634 463 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 MRPS25P82663 173 aaKnown RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 CASC4Q6P4E1 433 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 OGFOD3Q6PK18 319 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 TMEM220Q6QAJ8 160 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 CES3Q6UWW8 571 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 EFL1Q7Z2Z2 1120 aaKnown RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 HOOK3Q86VS8 718 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 ZNF547Q8IVP9 402 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 PIANPQ8IYJ0 282 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 GPR156Q8NFN8 814 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 IFI44Q8TCB0 444 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 NAT14Q8WUY8 206 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.53■□□□□ 0.242e-10■■■■■ 82.5
PRKCB-210ENST00000498739 CCDC97Q96F63 343 aaPredicted RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 KIFC1Q9BW19 673 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 OSGEPL1Q9H4B0 414 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 MRM3Q9HC36 420 aaKnown RBP16.53■□□□□ 0.24
PRKCB-210ENST00000498739 ZDHHC3Q9NYG2 299 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 SAMD15Q9P1V8 674 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 SLC23A2Q9UGH3 650 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 SOX13Q9UN79 622 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 DNAJC16Q9Y2G8 782 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 PCDHGA1Q9Y5H4 931 aa16.53■□□□□ 0.24
PRKCB-210ENST00000498739 EME2A4GXA9 379 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-210ENST00000498739 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 CFAP99D6REC4 459 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 SNX2O60749 519 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 DKK1O94907 266 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 TRIM16O95361 564 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 IVDP26440 423 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 B4GALNT1Q00973 533 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 ILKQ13418 452 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 DBN1Q16643 649 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 C14orf28Q4W4Y0 310 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 FNBP1LQ5T0N5 605 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 DHRS13Q6UX07 377 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.24
PRKCB-210ENST00000498739 C11orf96Q7Z7L8 435 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 CHCHD4Q8N4Q1 142 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 OR4L1Q8NH43 312 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 HEXDCQ8WVB3 486 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 PATE1Q8WXA2 126 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 ADAMTS14Q8WXS8 1223 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 MFSD3Q96ES6 412 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 SGF29Q96ES7 293 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 TIMM29Q9BSF4 260 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 TREX1Q9NSU2 369 aa16.52■□□□□ 0.24
PRKCB-210ENST00000498739 DCHS1Q96JQ0 3298 aa16.52■□□□□ 0.23
PRKCB-210ENST00000498739 PLXNB3Q9ULL4 1909 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 FAM187AA6NFU0 413 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 SDR42E2A6NKP2 422 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 RAD51CO43502 376 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 POP7O75817 140 aaKnown RBP16.51■□□□□ 0.23
PRKCB-210ENST00000498739 VCLP18206 1134 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 PBLDP30039 288 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-210ENST00000498739 MAGEA3P43357 314 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 MAZP56270 477 aaKnown RBP16.51■□□□□ 0.23
PRKCB-210ENST00000498739 WHAMMP3Q1A5X7 153 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 FASTKD1Q53R41 847 aaKnown RBP16.51■□□□□ 0.23
PRKCB-210ENST00000498739 PERM1Q5SV97 790 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 MAATS1Q7Z4T9 603 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 NAGSQ8N159 534 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 BEND7Q8N7W2 519 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-210ENST00000498739 NAT6Q93015 286 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 SNF8Q96H20 258 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 ZNF514Q96K75 400 aaPredicted RBP16.51■□□□□ 0.23
PRKCB-210ENST00000498739 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 ANAPC5Q9UJX4 755 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 CABIN1Q9Y6J0 2220 aa16.51■□□□□ 0.23
PRKCB-210ENST00000498739 IGLV3-16A0A075B6K0 115 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 TRBV23OR9-2A0A075B6M9 112 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 HYAL3O43820 417 aaPredicted RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 EML2O95834 649 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 TOP3BO95985 862 aaKnown RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 GP1BAP07359 652 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 CDK4P11802 303 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 ATP1B2P14415 290 aaPredicted RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 CLCNKAP51800 687 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 ITGA8P53708 1063 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 BIRC2Q13490 618 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 MORF4L2Q15014 288 aa16.5■□□□□ 0.23
PRKCB-210ENST00000498739 SMAD1Q15797 465 aaKnown RBP16.5■□□□□ 0.23
PRKCB-210ENST00000498739 LYPLAL1Q5VWZ2 237 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms