RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CLEC16AQ2KHT3 1053 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 YIF1BQ5BJH7 314 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAM209BQ5JX69 171 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAXCQ5TGI0 409 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 NAPEPLDQ6IQ20 393 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 TUBA3EQ6PEY2 450 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 CRTC3Q6UUV7 619 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 LAYNQ6UX15 382 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 MFSD7Q6UXD7 560 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 CTU1Q7Z7A3 348 aaKnown RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 ACOT1Q86TX2 421 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 CAND1Q86VP6 1230 aaKnown RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 CTAGE3PQ8IX95 158 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 LINC00518Q8N0U6 118 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 C12orf29Q8N999 325 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZBTB44Q8NCP5 570 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZNF420Q8TAQ5 688 aaPredicted RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 PIWIL2Q8TC59 973 aaKnown RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 ITCHQ96J02 903 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 CLUHP3Q96NS8 147 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 LPIN3Q9BQK8 851 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 MS4A7Q9GZW8 240 aaPredicted RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 RNF208Q9H0X6 261 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 COG4Q9H9E3 785 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 ERVMER34-1Q9H9K5 563 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 SSU72Q9NP77 194 aaKnown RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 TJP2Q9UDY2 1190 aa5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 APOBEC2Q9Y235 224 aaKnown RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 TIMM13Q9Y5L4 95 aaPredicted RBP5.75□□□□□ -1.49
SOX2-OT-218ENST00000498731 UNC80Q8N2C7 3258 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 ARPC4-TTLL3A0A0A6YYG9 625 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 KLF11O14901 512 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SMAD7O15105 426 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 ATG13O75143 517 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 BCAS2O75934 225 aaPredicted RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 ALDH1A1P00352 501 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SMIM10L2AP0DMW4 78 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SMIM10L2BP0DMW5 78 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CD46P15529 392 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 DDCP20711 480 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 AGXTP21549 392 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 PSMA2P25787 234 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CENPAP49450 140 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 GP2P55259 537 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 GPR85P60893 370 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 TAP1Q03518 808 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 MMRN1Q13201 1228 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 IMPG1Q17R60 797 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 DUSP28Q4G0W2 176 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 TBCELQ5QJ74 424 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 DENND1BQ6P3S1 775 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 LIPIQ6XZB0 460 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CENPUQ71F23 418 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZER1Q7Z7L7 766 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 ADAMTSL2Q86TH1 951 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CCDC103Q8IW40 242 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 MCOLN2Q8IZK6 566 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SHCBP1Q8NEM2 672 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 C18orf25Q96B23 403 aaPredicted RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAM149B1Q96BN6 582 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 PPWD1Q96BP3 646 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CNDP1Q96KN2 507 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CDADC1Q9BWV3 514 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 OR2B2Q9GZK3 357 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 NXF3Q9H4D5 531 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 RPRD1BQ9NQG5 326 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 C14orf119Q9NWQ9 140 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 PAK1IP1Q9NWT1 392 aaPredicted RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 STMN3Q9NZ72 180 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 PKD2L2Q9NZM6 624 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 FLRT1Q9NZU1 646 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 DIMT1Q9UNQ2 313 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 VWA7Q9Y334 891 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 PSAT1Q9Y617 370 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 DOCK1Q14185 1865 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 DOCK3Q8IZD9 2030 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 IGKV6D-21A0A0A0MT36 114 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 OR5K3A6NET4 321 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZBTB42B2RXF5 422 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 HCRTO43612 131 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 NOL3O60936 208 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 OR7A10O76100 309 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 VAPBO95292 243 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 CHRNGP07510 517 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 KRT3P12035 628 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 EIF2DP41214 584 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 GCNT1Q02742 428 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 MBTD1Q05BQ5 628 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 MERTKQ12866 999 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 MADCAM1Q13477 382 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SURF1Q15526 300 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 GFOD2Q3B7J2 385 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SLC36A3Q495N2 470 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 SOWAHCQ53LP3 525 aaPredicted RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 C2orf27AQ580R0 203 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 METTL2BQ6P1Q9 378 aaKnown RBP5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAM122CQ6P4D5 195 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 NUDT18Q6ZVK8 323 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 WDR49Q8IV35 697 aa5.74□□□□□ -1.49
SOX2-OT-218ENST00000498731 COLGALT2Q8IYK4 626 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms