RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 GPR18Q14330 331 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF569Q5MCW4 686 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
CCDC58-207ENST00000498466 JMJD6Q6NYC1 403 aaPredicted RBP13.7□□□□□ -0.22
CCDC58-207ENST00000498466 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 LRRC49Q8IUZ0 686 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF653Q96CK0 615 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 CXorf40BQ96DE9 158 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 SYT11Q9BT88 431 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 SPATA16Q9BXB7 569 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 MFRPQ9BY79 579 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 TRIM39Q9HCM9 518 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 RBM22Q9NW64 420 aaKnown RBP eCLIP13.7□□□□□ -0.221e-15■■■■■ 44.3
CCDC58-207ENST00000498466 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 RPL26L1Q9UNX3 145 aaKnown RBP13.7□□□□□ -0.22
CCDC58-207ENST00000498466 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 OR52A4PA6NMU1 304 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 GPR89AB7ZAQ6 455 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 KMOO15229 486 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 DPM1O60762 260 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 GPR89BP0CG08 455 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 FOLR1P15328 257 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF7P17097 686 aaPredicted RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 VARSP26640 1264 aaKnown RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 PDE1BQ01064 536 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 KRT81Q14533 505 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 KCNAB1Q14722 419 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 ALG1LQ6GMV1 187 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 ADGRG6Q86SQ4 1221 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 LRRTM4Q86VH4 590 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 RBM12BQ8IXT5 1001 aaKnown RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 FCRL4Q96PJ5 515 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 ERGIC2Q96RQ1 377 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 MLPHQ9BV36 600 aaPredicted RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 PCDH18Q9HCL0 1135 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 MRPL47Q9HD33 250 aaKnown RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 SLC40A1Q9NP59 571 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 TRIM10Q9UDY6 481 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 EPHA6Q9UF33 1036 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 FARSAQ9Y285 508 aaKnown RBP13.69□□□□□ -0.22
CCDC58-207ENST00000498466 PCDHGB7Q9Y5F8 929 aa13.69□□□□□ -0.22
CCDC58-207ENST00000498466 CSMD1Q96PZ7 3565 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 IGHV5-51A0A0C4DH38 117 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 CHUKO15111 745 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 MATN3O15232 486 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 MFSD11O43934 449 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 BRAFP15056 766 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 IL4RP24394 825 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 PTGIRP43119 386 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ARL4DP49703 201 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 DRG2P55039 364 aaKnown RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 PPP1CAP62136 330 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ACY1Q03154 408 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 NIPAL4Q0D2K0 466 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 QPCTQ16769 361 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 CCDC122Q5T0U0 273 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 TXNRD3NBQ6F5E7 133 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ABRAXAS1Q6UWZ7 409 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 Q8NA96 180 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 UBXN4Q92575 508 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 MAML1Q92585 1016 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 MR1Q95460 341 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 SLC41A2Q96JW4 573 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF514Q96K75 400 aaPredicted RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 TIMM29Q9BSF4 260 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ZSCAN5AQ9BUG6 496 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 RAB33BQ9H082 229 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 DTLQ9NZJ0 730 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 LIMA1Q9UHB6 759 aaKnown RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ERRFI1Q9UJM3 462 aaPredicted RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 RP1L1Q8IWN7 2480 aaPredicted RBP13.68□□□□□ -0.22
CCDC58-207ENST00000498466 ANKRD66B4E2M5 251 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
CCDC58-207ENST00000498466 MTX2O75431 263 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 SLC4A1P02730 911 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 HLA-DQB2P05538 268 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 EBLN1P0CF75 366 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 LPOP22079 712 aaPredicted RBP13.67□□□□□ -0.22
CCDC58-207ENST00000498466 IDSP22304 550 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 GALNT2Q10471 571 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 SLC6A19Q695T7 634 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 RHOT1Q8IXI2 618 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 FDCSPQ8NFU4 85 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 TEKT4Q8WW24 435 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 GLYATL1Q969I3 302 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 TCTN2Q96GX1 697 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 ADGRE3Q9BY15 652 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 ZFYVE1Q9HBF4 777 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 WASH6PQ9NQA3 447 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 FGF21Q9NSA1 209 aa13.67□□□□□ -0.22
CCDC58-207ENST00000498466 TEP1Q99973 2627 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms