RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 EPS8Q12929 822 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 GTF2H2Q13888 395 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ZNF234Q14588 700 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM35AQ53FP2 167 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 RAB41Q5JT25 222 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 PLEKHS1Q5SXH7 462 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 IRAK1BP1Q5VVH5 260 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 WBP2NLQ6ICG8 309 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 GTF2H2CQ6P1K8 395 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 C18orf65Q6ZTR6 163 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ASB18Q6ZVZ8 466 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ATG9AQ7Z3C6 839 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 EXOC3L1Q86VI1 746 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 TMPRSS12Q86WS5 348 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 KMT5CQ86Y97 462 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 EMC1Q8N766 993 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 POC1AQ8NBT0 407 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 SLC38A5Q8WUX1 472 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 FEM1CQ96JP0 617 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 PKP4Q99569 1192 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 SYT17Q9BSW7 474 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 KLHL1Q9NR64 748 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 PLSCR4Q9NRQ2 329 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 ANKEF1Q9NU02 776 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 CLIC5Q9NZA1 410 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
PTPRK-215ENST00000498284 TTLL3Q9Y4R7 772 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
PTPRK-215ENST00000498284 PRSS44E7EML9 344 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 TIMM44O43615 452 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 PLPP2O43688 288 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 EIF5BO60841 1220 aaKnown RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 LDB3O75112 727 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 BEST1O76090 585 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 AKR1B1P15121 316 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 DGKAP23743 735 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 KRT20P35900 424 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 EIF2DP41214 584 aaKnown RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 AMPHP49418 695 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 KRTAP10-9P60411 292 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 EEF1A1P68104 462 aaKnown RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 MRPS5P82675 430 aaKnown RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 COG7P83436 770 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 STK4Q13043 487 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 SYT16Q17RD7 645 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 EEF1A1P5Q5VTE0 462 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 TMCO3Q6UWJ1 677 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 EPHX4Q8IUS5 362 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 ARID3BQ8IVW6 561 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 SLC38A9Q8NBW4 561 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 GSDMBQ8TAX9 411 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 CCDC34Q96HJ3 373 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 LMLNQ96KR4 655 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 PAG1Q9NWQ8 432 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 SUCLA2Q9P2R7 463 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 POLG2Q9UHN1 485 aa4.29□□□□□ -1.72
PTPRK-215ENST00000498284 DBNLQ9UJU6 430 aaKnown RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-215ENST00000498284 A0A1W2PP11 408 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 ASPDHA6ND91 283 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 TMEM8BA6NDV4 472 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 A8MV72 311 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 CTDSP2O14595 271 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 BUB3O43684 328 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 POLR2CP19387 275 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 SAT1P21673 171 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 KCNA5P22460 613 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 HRH2P25021 359 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 MMP14P50281 582 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 MFAP4P55083 255 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 SPOCK1Q08629 439 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 TROAPQ12815 778 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 MVPQ14764 893 aaKnown RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 KLHL22Q53GT1 634 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 RAD9BQ6WBX8 426 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 ZNF704Q6ZNC4 412 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 GALNT5Q7Z7M9 940 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 SCYL3Q8IZE3 742 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 OR8H2Q8N162 312 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 MUC20Q8N307 709 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 RFLNBQ8N5W9 214 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 IL17RCQ8NAC3 791 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 CD101Q93033 1021 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 ERP27Q96DN0 273 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 GFI1Q99684 422 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 LRMDAQ9H2I8 198 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 HRH4Q9H3N8 390 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 TCP11L1Q9NUJ3 509 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 TRMT1Q9NXH9 659 aaKnown RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 CHORDC1Q9UHD1 332 aaPredicted RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 NRBP1Q9UHY1 535 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 EXO1Q9UQ84 846 aaKnown RBP4.28□□□□□ -1.72
PTPRK-215ENST00000498284 DLGAP4Q9Y2H0 992 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 PRAG1Q86YV5 1406 aa4.28□□□□□ -1.72
PTPRK-215ENST00000498284 CCDC180Q9P1Z9 1646 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms