RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TRIM61Q5EBN2 209 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 TEDDM1Q5T9Z0 273 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 ADGRG6Q86SQ4 1221 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 SLC26A11Q86WA9 606 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 C2CD4AQ8NCU7 369 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-227ENST00000498056 LPGAT1Q92604 370 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 CYTH2Q99418 400 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 KCNH6Q9H252 994 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 EPB41L4BQ9H329 900 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 SMOC1Q9H4F8 434 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 CARS2Q9HA77 564 aaKnown RBP13.41□□□□□ -0.26
CPNE1-227ENST00000498056 FSCN3Q9NQT6 498 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 INTS10Q9NVR2 710 aaKnown RBP13.41□□□□□ -0.26
CPNE1-227ENST00000498056 ATXN10Q9UBB4 475 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 FAM8A1Q9UBU6 413 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 GNPTGQ9UJJ9 305 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 CRYL1Q9Y2S2 319 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
CPNE1-227ENST00000498056 IGLV3-16A0A075B6K0 115 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 SPTY2D1-AS1A0A0U1RR47 76 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 POC1B-GALNT4F8VUJ3 575 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 VEGFDO43915 354 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 ZNF8P17098 575 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-227ENST00000498056 NSG1P42857 185 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 CD151P48509 253 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 TMEM115Q12893 351 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-227ENST00000498056 GRIK2Q13002 908 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 FZD2Q14332 565 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 DUOXA1Q1HG43 343 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 ALG11Q2TAA5 492 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 ZNF542PQ5EBM4 170 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 ZNF789Q5FWF6 425 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 KCTD16Q68DU8 428 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 ZNF449Q6P9G9 518 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 PACS1Q6VY07 963 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 KIAA0408Q6ZU52 694 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 STRA8Q7Z7C7 330 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 SPATS2Q86XZ4 545 aaKnown RBP13.4□□□□□ -0.26
CPNE1-227ENST00000498056 GALNT13Q8IUC8 556 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 HID1Q8IV36 788 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 RASGEF1AQ8N9B8 481 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 CEP76Q8TAP6 659 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 OR1E3Q8WZA6 343 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 TSACCQ96A04 125 aaPredicted RBP13.4□□□□□ -0.26
CPNE1-227ENST00000498056 OR2M4Q96R27 311 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 PAFAH2Q99487 392 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 CYP4F12Q9HCS2 524 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 DNAJC28Q9NX36 388 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 NCDNQ9UBB6 729 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 SUFUQ9UMX1 484 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 ANKRD6Q9Y2G4 727 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 PCDHGA5Q9Y5G8 931 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 IKBKGQ9Y6K9 419 aa13.4□□□□□ -0.26
CPNE1-227ENST00000498056 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 PRMT5O14744 637 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 RASGRP1O95267 797 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 C1QAP02745 245 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 CEACAM5P06731 702 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 IVLP07476 585 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 ACP5P13686 325 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 ATP1B2P14415 290 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 ITGB6P18564 788 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 GP5P40197 560 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 CTSCP53634 463 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 SRP54P61011 504 aaKnown RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 PPARDQ03181 441 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 INSCQ1MX18 579 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 PTRHD1Q6GMV3 140 aaKnown RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 TCEAL6Q6IPX3 200 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 CNSTQ6PJW8 725 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 LRRTM4Q86VH4 590 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 LRRC6Q86X45 466 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 DCP2Q8IU60 420 aaKnown RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 PHACTR4Q8IZ21 702 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 MREGQ8N565 214 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 CLDN19Q8N6F1 224 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 BEND7Q8N7W2 519 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 GPATCH11Q8N954 259 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 SUMF1Q8NBK3 374 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 HEXDCQ8WVB3 486 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 TCEAL3Q969E4 200 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 TCF12Q99081 682 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 NDNQ99608 321 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 CPNE1Q99829 537 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 SLC17A4Q9Y2C5 497 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 PCYT1BQ9Y5K3 369 aaPredicted RBP13.39□□□□□ -0.27
CPNE1-227ENST00000498056 SNX11Q9Y5W9 270 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 PRSS21Q9Y6M0 314 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 MYO15AQ9UKN7 3530 aa13.39□□□□□ -0.27
CPNE1-227ENST00000498056 GPR89AB7ZAQ6 455 aa13.38□□□□□ -0.27
CPNE1-227ENST00000498056 F8W8V4 182 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms