RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TTC21BQ7Z4L5 1316 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 KTN1Q86UP2 1357 aaKnown RBP2.83□□□□□ -1.96
RIF1-212ENST00000498041 ABCC11Q96J66 1382 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 DIP2AQ14689 1571 aa2.83□□□□□ -1.96
RIF1-212ENST00000498041 PIK3C2AO00443 1686 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ZNF142P52746 1687 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 ITSN1Q15811 1721 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 FMN2Q9NZ56 1722 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 VIRMAQ69YN4 1812 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 FAM237BA0A1B0GVD1 139 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 A0A1W2PQF6 199 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 LILRA5A6NI73 299 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 JRKO75564 520 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ZNF432O94892 652 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 MLYCDO95822 493 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 CD4P01730 458 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 IGHDP01880 384 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 UBA1P22314 1058 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 DGKAP23743 735 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 CHMP24386 653 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 NFKBIAP25963 317 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 MAN1A1P33908 653 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 GNL1P36915 607 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 USP8P40818 1118 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ZNF132P52740 706 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 DLX5P56178 289 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ZBED6P86452 979 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 CEBPZQ03701 1054 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 RELQ04864 619 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 NIPAL4Q0D2K0 466 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 EIF4A2Q14240 407 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 ZRSR1Q15695 479 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 SYT16Q17RD7 645 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 CDONQ4KMG0 1287 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 FAM76BQ5HYJ3 339 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 DCST1Q5T197 706 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 GPATCH4Q5T3I0 446 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 IRAK1BP1Q5VVH5 260 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 CYP20A1Q6UW02 462 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 GFRALQ6UXV0 394 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 G2E3Q7L622 706 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 CUZD1Q86UP6 607 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ODF3L1Q8IXM7 274 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 BEST3Q8N1M1 668 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 FRMD1Q8N878 549 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 MAB21L3Q8N8X9 362 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 SLC20A1Q8WUM9 679 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 UCMAQ8WVF2 138 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 SGCDQ92629 289 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 APBB2Q92870 758 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ARHGEF2Q92974 986 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 CD101Q93033 1021 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ABTB1Q969K4 478 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 ARHGEF26Q96DR7 871 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 PERPQ96FX8 193 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 GRAMD2BQ96HH9 432 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 FEM1CQ96JP0 617 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 TTC14Q96N46 770 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 NAP1L4Q99733 375 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 RANGRFQ9HD47 186 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 DIAPH3Q9NSV4 1193 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 OLA1Q9NTK5 396 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 DONSONQ9NYP3 566 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ORC3Q9UBD5 711 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 AASSQ9UDR5 926 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ACSL5Q9ULC5 683 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 MAP3K19Q56UN5 1328 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 EVC2Q86UK5 1308 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 PLEKHG1Q9ULL1 1385 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 NPHP4O75161 1426 aaPredicted RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 CPSF1Q10570 1443 aaKnown RBP2.82□□□□□ -1.96
RIF1-212ENST00000498041 ATP7BP35670 1465 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 SLIT1O75093 1534 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 TOPAZ1Q8N9V7 1692 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 KNDC1Q76NI1 1749 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 ANKRD26Q9UPS8 1709 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 LTN1O94822 1766 aa2.82□□□□□ -1.96
RIF1-212ENST00000498041 GREB1LQ9C091 1923 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 A0A087X0M5 115 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 A0A1B0GX30 115 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 M0QZ24 198 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 NDUFS3O75489 264 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 DDNO94850 711 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 CAMTA2O94983 1202 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 DDX58O95786 925 aaKnown RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 EIF2S1P05198 315 aaKnown RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 CDH1P12830 882 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 AMD1P17707 334 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 CDH2P19022 906 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 PAX3P23760 479 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 CORO1AP31146 461 aaKnown RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 PRKAR2BP31323 418 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 PRCPP42785 496 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 FUT6P51993 359 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 TAS2R38P59533 333 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 MAD2L1Q13257 205 aaPredicted RBP2.81□□□□□ -1.96
RIF1-212ENST00000498041 RALBP1Q15311 655 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 ADIPOQQ15848 244 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 DECR1Q16698 335 aa2.81□□□□□ -1.96
RIF1-212ENST00000498041 MTHFSDQ2M296 383 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms