RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CCL22O00626 93 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 GRID2O43424 1007 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 NOBOXO60393 691 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A9O60656 530 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 MTX2O75431 263 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 TOP3BO95985 862 aaKnown RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 KRT14P02533 472 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A6P19224 532 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A1P22309 533 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A4P22310 534 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 AK4P27144 223 aaPredicted RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 CA5AP35218 305 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A3P35503 534 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A5P35504 534 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ACTR1BP42025 376 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 VPS41P49754 854 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ACTR1AP61163 376 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 CDK16Q00536 496 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 GPS1Q13098 491 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 PEX6Q13608 980 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 KCNJ11Q14654 390 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 TRIP13Q15645 432 aaPredicted RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 SMAD1Q15797 465 aaKnown RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 KCTD19Q17RG1 926 aaPredicted RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 LDLRAP1Q5SW96 308 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 CERCAMQ5T4B2 595 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF534Q76KX8 674 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 GDAP1Q8TB36 358 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF398Q8TD17 642 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 GRK7Q8WTQ7 553 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 STYXQ8WUJ0 223 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 CAPZA3Q96KX2 299 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 RANBP9Q96S59 729 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 SCNM1Q9BWG6 230 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 DPEP2Q9H4A9 486 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ASB8Q9H765 288 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A7Q9HAW7 530 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A10Q9HAW8 530 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 UGT1A8Q9HAW9 530 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 SPATS2LQ9NUQ6 558 aaKnown RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ZNHIT2Q9UHR6 403 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 PADI4Q9UM07 663 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 PLEKHM1Q9Y4G2 1056 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 NEUROG3Q9Y4Z2 214 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 ASPMQ8IZT6 3477 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 IGF2RP11717 2491 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 CPED1A4D0V7 1026 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 AP3B1O00203 1094 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 CDK14O94921 469 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ECEL1O95672 775 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ACP5P13686 325 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 SPINK2P20155 84 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ITGALP20701 1170 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ADRA1DP25100 572 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 MC4RP32245 332 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ETF1P62495 437 aaKnown RBP11.09□□□□□ -0.63
ERCC8-208ENST00000497892 TMPRSS15P98073 1019 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 E2F1Q01094 437 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 TMEM115Q12893 351 aaPredicted RBP11.09□□□□□ -0.63
ERCC8-208ENST00000497892 LAMB3Q13751 1172 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 HLTFQ14527 1009 aaKnown RBP eCLIP11.09□□□□□ -0.638e-6■■■■□ 21.3
ERCC8-208ENST00000497892 GPR33Q49SQ1 333 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 C14orf28Q4W4Y0 310 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 PERM1Q5SV97 790 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 CRTC3Q6UUV7 619 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 CHST15Q7LFX5 561 aaPredicted RBP11.09□□□□□ -0.63
ERCC8-208ENST00000497892 TMPRSS7Q7RTY8 843 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 SNX20Q7Z614 316 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 LRRTM4Q86VH4 590 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 C17orf82Q86X59 251 aaPredicted RBP11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF547Q8IVP9 402 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 SFTPA2Q8IWL1 248 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 NXPE1Q8N323 547 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 GALNT15Q8N3T1 639 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 RASGEF1AQ8N9B8 481 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF511Q8NB15 262 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 OR6C4Q8NGE1 309 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 PEX13Q92968 403 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 DDX47Q9H0S4 455 aaKnown RBP11.09□□□□□ -0.63
ERCC8-208ENST00000497892 GULP1Q9UBP9 304 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 PCYOX1Q9UHG3 505 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 RIMKLBQ9ULI2 386 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 TCAF1Q9Y4C2 921 aa11.09□□□□□ -0.63
ERCC8-208ENST00000497892 TPRP12270 2363 aaKnown RBP11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TRBV5-4A0A0C4DH59 114 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TCRBV7S3A2A0A539 114 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 A6NCN8 305 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 PRR19A6NJB7 356 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 CFAP99D6REC4 459 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 KMOO15229 486 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 OPA1O60313 960 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 TMEM63AO94886 807 aa11.08□□□□□ -0.64
ERCC8-208ENST00000497892 GLB1P16278 677 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms