RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SMOC1Q9H4F8 434 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 CAB39LQ9H9S4 337 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 CD93Q9NPY3 652 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 FBXL12Q9NXK8 326 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 ZDHHC3Q9NYG2 299 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 NKIRAS1Q9NYS0 192 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 SERGEFQ9UGK8 458 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 DCDC2Q9UHG0 476 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 GMEB2Q9UKD1 530 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 ADAM21Q9UKJ8 722 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 CRYL1Q9Y2S2 319 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 CACNA1AO00555 2505 aa14.05□□□□□ -0.16
VPS26A-209ENST00000497564 ZFC3H1O60293 1989 aaKnown RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 A0A087X1B8 175 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 UBA6A0AVT1 1052 aaPredicted RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 GPR39O43194 453 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 MMP20O60882 483 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 RNASEH2AO75792 299 aaKnown RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 RECQL5O94762 991 aaPredicted RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 SLC35E2BP0CK96 405 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 PKMP14618 531 aaKnown RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 NDUFV2P19404 249 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 CA5AP35218 305 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 RPA3P35244 121 aaPredicted RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 SLC26A3P40879 764 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 MDH1P40925 334 aaKnown RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 GYS2P54840 703 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 SLC12A2P55011 1212 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 CTSL3PQ5NE16 218 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 KIAA1161Q6NSJ0 714 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 CEP97Q8IW35 865 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 DDHD1Q8NEL9 900 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 MDM1Q8TC05 714 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 TCP10LQ8TDR4 215 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 HEXDCQ8WVB3 486 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 SCAMP4Q969E2 229 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 AP2M1Q96CW1 435 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 NDNQ99608 321 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 RIOK2Q9BVS4 552 aaKnown RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 CCDC68Q9H2F9 335 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 KDM4CQ9H3R0 1056 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 PREBQ9HCU5 417 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 POLMQ9NP87 494 aaPredicted RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 INTS9Q9NV88 658 aaKnown RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 CD84Q9UIB8 345 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 MBD1Q9UIS9 605 aaPredicted RBP14.04□□□□□ -0.16
VPS26A-209ENST00000497564 TLK1Q9UKI8 766 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 TMPRSS11EQ9UL52 423 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 GRID1Q9ULK0 1009 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 PLLPQ9Y342 182 aa14.04□□□□□ -0.16
VPS26A-209ENST00000497564 THADAQ6YHU6 1953 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 H3BMM5 538 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 LZTS3O60299 673 aaPredicted RBP14.03□□□□□ -0.16
VPS26A-209ENST00000497564 OR1I1O60431 355 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 TM7SF2O76062 418 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 ASMTLO95671 621 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 IGLV3-19P01714 112 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 PYGLP06737 847 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 DHRS4L1P0CG22 281 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 TEAD1P28347 426 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 FMO4P31512 558 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 NSG1P42857 185 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 ETV4P43268 484 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 ADPRHP54922 357 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 CDKN2DP55273 166 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 MAP7D1Q3KQU3 841 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 USP39Q53GS9 565 aaKnown RBP14.03□□□□□ -0.16
VPS26A-209ENST00000497564 PPM1JQ5JR12 505 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 GPRC6AQ5T6X5 926 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 NEK5Q6P3R8 708 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 KYAT3Q6YP21 454 aaKnown RBP14.03□□□□□ -0.16
VPS26A-209ENST00000497564 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 CDHR3Q6ZTQ4 885 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 RAPH1Q70E73 1250 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 CACUL1Q86Y37 369 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 PGBD3Q8N328 593 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 KCNJ9Q92806 393 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 ZC3H10Q96K80 434 aaKnown RBP14.03□□□□□ -0.16
VPS26A-209ENST00000497564 COPS8Q99627 209 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 SLC13A1Q9BZW2 595 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 CLPBQ9H078 707 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 IQCGQ9H095 443 aaKnown RBP14.03□□□□□ -0.16
VPS26A-209ENST00000497564 VPS11Q9H270 941 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 TAS2R13Q9NYV9 303 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 GNPTGQ9UJJ9 305 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 NCKAP1Q9Y2A7 1128 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 MED16Q9Y2X0 877 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 COQ6Q9Y2Z9 468 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 ACOT9Q9Y305 439 aa14.03□□□□□ -0.16
VPS26A-209ENST00000497564 GOLGA8CPA6NN73 597 aa14.02□□□□□ -0.17
VPS26A-209ENST00000497564 FADS2P1A8MWK0 482 aa14.02□□□□□ -0.17
VPS26A-209ENST00000497564 PHGDHO43175 533 aaKnown RBP14.02□□□□□ -0.17
VPS26A-209ENST00000497564 SHOX2O60902 331 aaPredicted RBP14.02□□□□□ -0.17
VPS26A-209ENST00000497564 EPN2O95208 641 aa14.02□□□□□ -0.17
VPS26A-209ENST00000497564 SOD1P00441 154 aa14.02□□□□□ -0.17
VPS26A-209ENST00000497564 ACADMP11310 421 aa14.02□□□□□ -0.17
VPS26A-209ENST00000497564 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms