RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 GABPB2Q8TAK5 448 aaPredicted RBP19.82■□□□□ 0.76
CTSD-206ENST00000497544 CALML6Q8TD86 181 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 DCUN1D1Q96GG9 259 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 C9orf72Q96LT7 481 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 WDR83Q9BRX9 315 aaKnown RBP19.82■□□□□ 0.76
CTSD-206ENST00000497544 EDEM2Q9BV94 578 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 ZDHHC5Q9C0B5 715 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 KLQ9UEF7 1012 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 NEUROG3Q9Y4Z2 214 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 OAS3Q9Y6K5 1087 aaKnown RBP19.82■□□□□ 0.76
CTSD-206ENST00000497544 PLXNB3Q9ULL4 1909 aa19.82■□□□□ 0.76
CTSD-206ENST00000497544 TRBV5-4A0A0C4DH59 114 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 C4orf47A7E2U8 309 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 GOLGA8KD6RF30 607 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 GOLGA8TH3BQL2 631 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 ARHGAP33O14559 1287 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 TNFRSF10CO14798 259 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 VEGFDO43915 354 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 GSTA2P09210 222 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 PRSS56P0CW18 603 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 RALBP11234 206 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 MSH3P20585 1137 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 ARNTP27540 789 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 AKT1P31749 480 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 CA5AP35218 305 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 CTSKP43235 329 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 ATXN3P54252 364 aaPredicted RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 PPARDQ03181 441 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 TMEM115Q12893 351 aaPredicted RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 GRIK2Q13002 908 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 GTF2H3Q13889 308 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 FZD2Q14332 565 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 SLMAPQ14BN4 828 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 SMAD1Q15797 465 aaKnown RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 COL28A1Q2UY09 1125 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 AARS2Q5JTZ9 985 aaKnown RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 TPRG1LQ5T0D9 272 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 ZNF648Q5T619 568 aaPredicted RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 STEAP4Q687X5 459 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 NEPROQ6NW34 567 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 CCNI2Q6ZMN8 369 aaPredicted RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 CAPN12Q6ZSI9 719 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 C3orf62Q6ZUJ4 267 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 MICALCLQ6ZW33 695 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 RD3Q7Z3Z2 195 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 KCNMB4Q86W47 210 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 PARGQ86W56 976 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 PROSER1Q86XN7 944 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 PIANPQ8IYJ0 282 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 DDHD1Q8NEL9 900 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 GSDMBQ8TAX9 411 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 HEXDCQ8WVB3 486 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 COPS8Q99627 209 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 ZCCHC2Q9C0B9 1178 aaKnown RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 PPANQ9NQ55 473 aaKnown RBP19.81■□□□□ 0.76
CTSD-206ENST00000497544 FSCN3Q9NQT6 498 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 ZDHHC3Q9NYG2 299 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 IL1RAPL1Q9NZN1 696 aa19.81■□□□□ 0.76
CTSD-206ENST00000497544 CFAP99D6REC4 459 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 PFDN6O15212 129 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 HYAL3O43820 417 aaPredicted RBP19.8■□□□□ 0.76
CTSD-206ENST00000497544 MTX2O75431 263 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 CDK14O94921 469 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 TNFP01375 233 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 CEACAM5P06731 702 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 MCM3P25205 808 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 ACRV1P26436 265 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 TNFRSF8P28908 595 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 SSTR1P30872 391 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 POLD2P49005 469 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 SRP54P61011 504 aaKnown RBP19.8■□□□□ 0.76
CTSD-206ENST00000497544 BNC1Q01954 994 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 MARK2Q7KZI7 788 aaKnown RBP19.8■□□□□ 0.76
CTSD-206ENST00000497544 ADGRG6Q86SQ4 1221 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 HID1Q8IV36 788 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 LMNTD2Q8IXW0 634 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 OXR1Q8N573 874 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTSD-206ENST00000497544 TSACCQ96A04 125 aaPredicted RBP19.8■□□□□ 0.76
CTSD-206ENST00000497544 OR2AG1Q9H205 316 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 ERVMER34-1Q9H9K5 563 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 CYP4F12Q9HCS2 524 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 DNAJC28Q9NX36 388 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 VPS18Q9P253 973 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 ATXN10Q9UBB4 475 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 KLK13Q9UKR3 277 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 SLC17A4Q9Y2C5 497 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 MSRB2Q9Y3D2 182 aa19.8■□□□□ 0.76
CTSD-206ENST00000497544 TP53BP1Q12888 1972 aaPredicted RBP19.8■□□□□ 0.76
CTSD-206ENST00000497544 PRSS38A1L453 326 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 DFNA5O60443 496 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 NDUFS3O75489 264 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 RASGRP1O95267 797 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 CAPNS1P04632 268 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 ERVK-10P10266 1014 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 CEACAM1P13688 526 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 TTPAP49638 278 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 BLKP51451 505 aa19.79■□□□□ 0.76
CTSD-206ENST00000497544 EIF2B5Q13144 721 aaKnown RBP19.79■□□□□ 0.76
CTSD-206ENST00000497544 ITIH4Q14624 930 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms