RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PPP2R2BQ00005 443 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 CXCL9Q07325 125 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 SNTA1Q13424 505 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 MVPQ14764 893 aaKnown RBP4.68□□□□□ -1.66
VPS36-206ENST00000497149 KRT79Q5XKE5 535 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 NADSYN1Q6IA69 706 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 GFRALQ6UXV0 394 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 C16orf82Q7Z2V1 217 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 ADGRA1Q86SQ6 560 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 MAP7D3Q8IWC1 876 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 ODF3L1Q8IXM7 274 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 GCSAMQ8N6F7 178 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 SLC44A1Q8WWI5 657 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 FIG4Q92562 907 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 RAD21L1Q9H4I0 556 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 VDAC3Q9Y277 283 aa4.68□□□□□ -1.66
VPS36-206ENST00000497149 LOC100509620A0A075B734 347 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 C4orf47A7E2U8 309 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 HNRNPCL2B2RXH8 293 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 J3QR06 171 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 ADRB2P07550 413 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 HSP90AA1P07900 732 aaKnown RBP4.67□□□□□ -1.66
VPS36-206ENST00000497149 KCNA5P22460 613 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 CCKARP32238 428 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 TMF1P82094 1093 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 MEP1AQ16819 746 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 C15orf59Q2T9L4 293 aaPredicted RBP4.67□□□□□ -1.66
VPS36-206ENST00000497149 IGSF11Q5DX21 431 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 BMP2KLQ5H9B9 411 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 GARNL3Q5VVW2 1013 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 PRSS57Q6UWY2 283 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 PRPF39Q86UA1 669 aaKnown RBP4.67□□□□□ -1.66
VPS36-206ENST00000497149 TMEM219Q86XT9 240 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 PM20D2Q8IYS1 436 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 OR8H2Q8N162 312 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 SLC5A8Q8N695 610 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 LSMEM1Q8N8F7 131 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 C9orf106Q8NAJ2 232 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 SNRNP27Q8WVK2 155 aaKnown RBP4.67□□□□□ -1.66
VPS36-206ENST00000497149 CDCA5Q96FF9 252 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 DDOQ99489 341 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 SLF1Q9BQI6 1058 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 RTN4RQ9BZR6 473 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 C6orf106Q9H6K1 298 aaPredicted RBP4.67□□□□□ -1.66
VPS36-206ENST00000497149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS36-206ENST00000497149 MORF4L1Q9UBU8 362 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 B3GALT5Q9Y2C3 310 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 PCDHGA5Q9Y5G8 931 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 CGNL1Q0VF96 1302 aa4.67□□□□□ -1.66
VPS36-206ENST00000497149 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 GLOD5A6NK44 160 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 TMEM189-UBE2V1I3L0A0 370 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZBTB43O43298 467 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ADAM20O43506 726 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 LDB3O75112 727 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 CCKBRP32239 447 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 GNL1P36915 607 aaPredicted RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 ISL1P61371 349 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 COG7P83436 770 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 RELQ04864 619 aaPredicted RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZBTB17Q13105 803 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 UBE2V1Q13404 147 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 GRAPQ13588 217 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 BAATQ14032 418 aaPredicted RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZNF234Q14588 700 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 CCDC96Q2M329 555 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZNF585BQ52M93 769 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 TMEM35AQ53FP2 167 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 C9orf57Q5W0N0 161 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZDHHC20Q5W0Z9 365 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 GPR139Q6DWJ6 353 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZNF534Q76KX8 674 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 TMPRSS12Q86WS5 348 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 DNAAF5Q86Y56 855 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZNF441Q8N8Z8 693 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 SYT2Q8N9I0 419 aaPredicted RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 APPL2Q8NEU8 664 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 LMO3Q8TAP4 145 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 PTPMT1Q8WUK0 201 aaPredicted RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 SLC38A5Q8WUX1 472 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 GCNAQ96QF7 691 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 PPIL3Q9H2H8 161 aaKnown RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 DDX31Q9H8H2 851 aaKnown RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 RCC2Q9P258 522 aaKnown RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 POLG2Q9UHN1 485 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 ZNF148Q9UQR1 794 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 PCDHAC2Q9Y5I4 1007 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 MAGED1Q9Y5V3 778 aaPredicted RBP4.66□□□□□ -1.66
VPS36-206ENST00000497149 KAT6BQ8WYB5 2073 aa4.66□□□□□ -1.66
VPS36-206ENST00000497149 LOC102723996A0A087X1L8 192 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 SAA2-SAA4A0A096LPE2 208 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 P4HA2O15460 535 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 NDUFS4O43181 175 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 TPOP07202 933 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 HLA-DOBP13765 273 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 ITGA2P17301 1181 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 IL11P20809 199 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 NMBRP28336 390 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 USP8P40818 1118 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 LMAN1P49257 510 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms