RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 TMEM131Q92545 1883 aa18.13■□□□□ 0.49
TSSC4-210ENST00000496468 UBA6A0AVT1 1052 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 H3BM21 787 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 LRP3O75074 770 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 CER1O95813 267 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF7P17097 686 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF8P17098 575 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 NSG1P42857 185 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 GNPDA1P46926 289 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 MPP1Q00013 466 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 B4GALNT1Q00973 533 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 UBAP2Q5T6F2 1119 aaKnown RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 KCTD16Q68DU8 428 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 CRTC3Q6UUV7 619 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 KIAA0408Q6ZU52 694 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 HID1Q8IV36 788 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 PHACTR4Q8IZ21 702 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 PNPLA1Q8N8W4 532 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 C2CD4AQ8NCU7 369 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 MYRIPQ8NFW9 859 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 FBF1Q8TES7 1133 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 AENQ8WTP8 325 aaKnown RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 TSACCQ96A04 125 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 OR2M4Q96R27 311 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 TCF12Q99081 682 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 TXLNGYQ9BZA5 131 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 CLPBQ9H078 707 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 ERVMER34-1Q9H9K5 563 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 CYP4F12Q9HCS2 524 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 FBXO6Q9NRD1 293 aaPredicted RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 NSMCE4AQ9NXX6 385 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 APOBEC3BQ9UH17 382 aaKnown RBP18.12■□□□□ 0.49
TSSC4-210ENST00000496468 FBXO5Q9UKT4 447 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 DGKBQ9Y6T7 804 aa18.12■□□□□ 0.49
TSSC4-210ENST00000496468 OR2AG2A6NM03 316 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 ARHGAP33O14559 1287 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 NUAK1O60285 661 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 OR1I1O60431 355 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 DNAJC6O75061 913 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 F7P08709 466 aaPredicted RBP18.11■□□□□ 0.49
TSSC4-210ENST00000496468 ATP1B2P14415 290 aaPredicted RBP18.11■□□□□ 0.49
TSSC4-210ENST00000496468 NME1P15531 152 aaKnown RBP18.11■□□□□ 0.49
TSSC4-210ENST00000496468 JUNDP17535 347 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 BLKP51451 505 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 SPEM2Q0P670 501 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 CTBP1Q13363 440 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF542PQ5EBM4 170 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 TEDDM1Q5T9Z0 273 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 RD3Q7Z3Z2 195 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 LRRTM4Q86VH4 590 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 RASGEF1AQ8N9B8 481 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 LPGAT1Q92604 370 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 PHOX2BQ99453 314 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 ELF4Q99607 663 aaPredicted RBP18.11■□□□□ 0.49
TSSC4-210ENST00000496468 GTPBP2Q9BX10 602 aaKnown RBP18.11■□□□□ 0.49
TSSC4-210ENST00000496468 SLC13A1Q9BZW2 595 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 GNPTGQ9UJJ9 305 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 PNMA8BQ9ULN7 279 aaPredicted RBP18.11■□□□□ 0.49
TSSC4-210ENST00000496468 CACNA1EQ15878 2313 aa18.11■□□□□ 0.49
TSSC4-210ENST00000496468 PI4KAP42356 2102 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 RALGAPA1Q6GYQ0 2036 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ADAMTS9Q9P2N4 1935 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 LNP1A1A4G5 178 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 FAM159BA6NKW6 160 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 F8W8V4 182 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 QSOX1O00391 747 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 PRMT5O14744 637 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 RIPK2O43353 540 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 GRID2O43424 1007 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 AP2A2O94973 939 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 TNFP01375 233 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 CSF2P04141 144 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ABHD2P08910 425 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF806P0C7X5 589 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ENGP17813 658 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ARRB1P49407 418 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 HK3P52790 923 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 CTSCP53634 463 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ATXN3P54252 364 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 EIF3BP55884 814 aaKnown RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 IRX4P78413 519 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 NAB1Q13506 487 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 EFTUD2Q15029 972 aaKnown RBP eCLIP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF423Q2M1K9 1284 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 PLA2G4EQ3MJ16 856 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 KBTBD12Q3ZCT8 623 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 BCL7AQ4VC05 210 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 CYS1Q717R9 158 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 GALNT7Q86SF2 657 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 SLC26A11Q86WA9 606 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 LRRC6Q86X45 466 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 CTAGE3PQ8IX95 158 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 NAT14Q8WUY8 206 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 UBLCP1Q8WVY7 318 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 CAVIN3Q969G5 261 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 SCARF2Q96GP6 870 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 ZNF514Q96K75 400 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-210ENST00000496468 SEMA4GQ9NTN9 838 aa18.1■□□□□ 0.49
TSSC4-210ENST00000496468 TXNDC16Q9P2K2 825 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms