RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TPH1P17752 444 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 VCLP18206 1134 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 GPR3P46089 330 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 XIAPP98170 497 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 CDK16Q00536 496 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 NR1D2Q14995 579 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 RTP5Q14D33 572 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 CYP1B1Q16678 543 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 CLPPQ16740 277 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 SKIDA1Q1XH10 827 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 ISXQ2M1V0 245 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 ZNF648Q5T619 568 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 GPRC6AQ5T6X5 926 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 RBM44Q6ZP01 1051 aaKnown RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 SNX20Q7Z614 316 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 SFRP1Q8N474 314 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 TAB3Q8N5C8 712 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 DNAAF3Q8N9W5 541 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 GLIS1Q8NBF1 620 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 AVL9Q8NBF6 648 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 STYXQ8WUJ0 223 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 HEXDCQ8WVB3 486 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 ULK4Q96C45 1275 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 RANBP9Q96S59 729 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 OSBPL9Q96SU4 736 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 ASB8Q9H765 288 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 ARFGAP3Q9NP61 516 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 EIF2B3Q9NR50 452 aaKnown RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 NLE1Q9NVX2 485 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 FKBPLQ9UIM3 349 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 PCYT1BQ9Y5K3 369 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-233ENST00000495899 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 CHD8Q9HCK8 2581 aa12.2□□□□□ -0.46
MRPL55-233ENST00000495899 LRP4O75096 1905 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 FRYQ5TBA9 3013 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 A6NCN8 305 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 RHPN2P1A8MT19 583 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 TMX2-CTNND1H3BSU7 103 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 MTX2O75431 263 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 ZSCAN5DPP0CG00 497 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 F3P13726 295 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 TCP1P17987 556 aaKnown RBP12.19□□□□□ -0.46
MRPL55-233ENST00000495899 ITGALP20701 1170 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 ADRA1DP25100 572 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 FASLGP48023 281 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KCNJ1P48048 391 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 CLDN6P56747 220 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 BIRC2Q13490 618 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 SPIDRQ14159 915 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 POU6F1Q14863 301 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KHDC1Q4VXA5 237 aaKnown RBP12.19□□□□□ -0.46
MRPL55-233ENST00000495899 WASH2PQ6VEQ5 465 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 PPP1R21Q6ZMI0 780 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 NLRP9Q7RTR0 991 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 SPRED1Q7Z699 444 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 MARCH9Q86YJ5 346 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 CCNJLQ8IV13 435 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 SFTPA2Q8IWL1 248 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 RASGEF1AQ8N9B8 481 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 OR52K1Q8NGK4 314 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 OR13C4Q8NGS5 318 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 COG1Q8WTW3 980 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 MAGOHBQ96A72 148 aaKnown RBP12.19□□□□□ -0.46
MRPL55-233ENST00000495899 NXPE2Q96DL1 559 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 MS4A14Q96JA4 679 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 GFM1Q96RP9 751 aaKnown RBP12.19□□□□□ -0.46
MRPL55-233ENST00000495899 LRRN3Q9H3W5 708 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 CCDC86Q9H6F5 360 aaKnown RBP12.19□□□□□ -0.46
MRPL55-233ENST00000495899 CASS4Q9NQ75 786 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 WASH6PQ9NQA3 447 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KLC4Q9NSK0 619 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 TBC1D29Q9UFV1 150 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 RIMKLBQ9ULI2 386 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 KCNK6Q9Y257 313 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 SLC30A1Q9Y6M5 507 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 BPTFQ12830 3046 aa12.19□□□□□ -0.46
MRPL55-233ENST00000495899 ACACBO00763 2458 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-233ENST00000495899 GOLGA6L10A0A0M3HER8 536 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 A0A1W2PQM1 296 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 HEATR9A2RTY3 570 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 PRR19A6NJB7 356 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 USP27XA6NNY8 438 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 CSO75390 466 aaKnown RBP12.18□□□□□ -0.46
MRPL55-233ENST00000495899 RPLP0P05388 317 aaKnown RBP12.18□□□□□ -0.46
MRPL55-233ENST00000495899 RALBP11234 206 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 MSH3P20585 1137 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 MAZP56270 477 aaKnown RBP12.18□□□□□ -0.46
MRPL55-233ENST00000495899 GNG11P61952 73 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 CCL7P80098 99 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 B4GALNT1Q00973 533 aa12.18□□□□□ -0.46
MRPL55-233ENST00000495899 SQSTM1Q13501 440 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms