RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CUEDC1Q9NWM3 386 aaPredicted RBP14.02□□□□□ -0.17
VARS-228ENST00000495010 MAP10Q9P2G4 905 aa14.02□□□□□ -0.17
VARS-228ENST00000495010 G3BP2Q9UN86 482 aaKnown RBP14.02□□□□□ -0.17
VARS-228ENST00000495010 SLC4A1P02730 911 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 HLA-DQB2P05538 268 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 NELFEP18615 380 aaKnown RBP14.01□□□□□ -0.17
VARS-228ENST00000495010 CD86P42081 329 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 NIPAL4Q0D2K0 466 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 GPR18Q14330 331 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 IHHQ14623 411 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 STX1AQ16623 288 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 UGT8Q16880 541 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 NCBP2-AS2Q69YL0 99 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 BPHLQ86WA6 291 aaPredicted RBP14.01□□□□□ -0.17
VARS-228ENST00000495010 TRAM1L1Q8N609 369 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 CCNYQ8ND76 341 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 FATE1Q969F0 183 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 FCRL4Q96PJ5 515 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 TIMM29Q9BSF4 260 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 SLC40A1Q9NP59 571 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 AIPL1Q9NZN9 384 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 TRIM10Q9UDY6 481 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 SLC23A2Q9UGH3 650 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 ADGRG1Q9Y653 693 aa14.01□□□□□ -0.17
VARS-228ENST00000495010 ZNF106Q9H2Y7 1883 aaKnown RBP14.01□□□□□ -0.17
VARS-228ENST00000495010 A1L4Q6 167 aa14□□□□□ -0.17
VARS-228ENST00000495010 ARGFXA6NJG6 315 aa14□□□□□ -0.17
VARS-228ENST00000495010 OR52A4PA6NMU1 304 aa14□□□□□ -0.17
VARS-228ENST00000495010 CHUKO15111 745 aa14□□□□□ -0.17
VARS-228ENST00000495010 VEGFDO43915 354 aa14□□□□□ -0.17
VARS-228ENST00000495010 CDK14O94921 469 aa14□□□□□ -0.17
VARS-228ENST00000495010 CD48P09326 243 aa14□□□□□ -0.17
VARS-228ENST00000495010 MX2P20592 715 aa14□□□□□ -0.17
VARS-228ENST00000495010 IL4RP24394 825 aa14□□□□□ -0.17
VARS-228ENST00000495010 PTPN4P29074 926 aa14□□□□□ -0.17
VARS-228ENST00000495010 GJC1P36383 396 aa14□□□□□ -0.17
VARS-228ENST00000495010 HALP42357 657 aa14□□□□□ -0.17
VARS-228ENST00000495010 DRG2P55039 364 aaKnown RBP14□□□□□ -0.17
VARS-228ENST00000495010 SLC25A11Q02978 314 aaKnown RBP14□□□□□ -0.17
VARS-228ENST00000495010 ACY1Q03154 408 aa14□□□□□ -0.17
VARS-228ENST00000495010 GTF2H3Q13889 308 aa14□□□□□ -0.17
VARS-228ENST00000495010 GALNT3Q14435 633 aa14□□□□□ -0.17
VARS-228ENST00000495010 PAFAH1B3Q15102 231 aaKnown RBP14□□□□□ -0.17
VARS-228ENST00000495010 NADK2Q4G0N4 442 aa14□□□□□ -0.17
VARS-228ENST00000495010 FILIP1LQ4L180 1135 aa14□□□□□ -0.17
VARS-228ENST00000495010 PDPK2PQ6A1A2 396 aa14□□□□□ -0.17
VARS-228ENST00000495010 PWWP2BQ6NUJ5 590 aa14□□□□□ -0.17
VARS-228ENST00000495010 FAM199XQ6PEV8 388 aaPredicted RBP14□□□□□ -0.17
VARS-228ENST00000495010 KLHL35Q6PF15 583 aa14□□□□□ -0.17
VARS-228ENST00000495010 ABRAXAS1Q6UWZ7 409 aa14□□□□□ -0.17
VARS-228ENST00000495010 APTXQ7Z2E3 356 aaKnown RBP14□□□□□ -0.17
VARS-228ENST00000495010 SYVN1Q86TM6 617 aa14□□□□□ -0.17
VARS-228ENST00000495010 NIPA2Q8N8Q9 360 aa14□□□□□ -0.17
VARS-228ENST00000495010 KCTD6Q8NC69 237 aa14□□□□□ -0.17
VARS-228ENST00000495010 UBXN4Q92575 508 aa14□□□□□ -0.17
VARS-228ENST00000495010 GLYATL1Q969I3 302 aa14□□□□□ -0.17
VARS-228ENST00000495010 BTBD6Q96KE9 485 aa14□□□□□ -0.17
VARS-228ENST00000495010 TSGA13Q96PP4 275 aa14□□□□□ -0.17
VARS-228ENST00000495010 SLC29A3Q9BZD2 475 aa14□□□□□ -0.17
VARS-228ENST00000495010 ISCUQ9H1K1 167 aa14□□□□□ -0.17
VARS-228ENST00000495010 SLAMF7Q9NQ25 335 aa14□□□□□ -0.17
VARS-228ENST00000495010 CASS4Q9NQ75 786 aa14□□□□□ -0.17
VARS-228ENST00000495010 EPHA6Q9UF33 1036 aa14□□□□□ -0.17
VARS-228ENST00000495010 ANAPC7Q9UJX3 599 aa14□□□□□ -0.17
VARS-228ENST00000495010 SHOC2Q9UQ13 582 aa14□□□□□ -0.17
VARS-228ENST00000495010 ZNF451Q9Y4E5 1061 aa14□□□□□ -0.17
VARS-228ENST00000495010 MAP4K5Q9Y4K4 846 aa14□□□□□ -0.17
VARS-228ENST00000495010 PCDHGA9Q9Y5G4 932 aaKnown RBP14□□□□□ -0.17
VARS-228ENST00000495010 TEX15Q9BXT5 2789 aa14□□□□□ -0.17
VARS-228ENST00000495010 SPTAN1Q13813 2472 aaKnown RBP13.99□□□□□ -0.17
VARS-228ENST00000495010 MYO1FO00160 1098 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 SEMA7AO75326 666 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 MTX2O75431 263 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 TIAF1O95411 115 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 DDAH2O95865 285 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 SKILP12757 684 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 PRKCIP41743 596 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 DCDC1P59894 354 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 RPS18P62269 152 aaKnown RBP13.99□□□□□ -0.17
VARS-228ENST00000495010 CHAF1BQ13112 559 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 CHRNA6Q15825 494 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 CCDC183Q5T5S1 534 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 AGAP9Q5VTM2 703 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 CPZQ66K79 652 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 WASH2PQ6VEQ5 465 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 MAP7D3Q8IWC1 876 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 GPR26Q8NDV2 337 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 GDAP1Q8TB36 358 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 LRRN4Q8WUT4 740 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 ZNF830Q96NB3 372 aaPredicted RBP13.99□□□□□ -0.17
VARS-228ENST00000495010 TTC25Q96NG3 672 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 NUP85Q9BW27 656 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 GPR63Q9BZJ6 419 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 RAB33BQ9H082 229 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 ING2Q9H160 280 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 WASH6PQ9NQA3 447 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 DTLQ9NZJ0 730 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 FARSAQ9Y285 508 aaKnown RBP13.99□□□□□ -0.17
VARS-228ENST00000495010 ICE1Q9Y2F5 2266 aa13.99□□□□□ -0.17
VARS-228ENST00000495010 USP9XQ93008 2570 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms