RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SRP72O76094 671 aaKnown RBP17.39■□□□□ 0.37
HDAC4-211ENST00000494800 JMJD7P0C870 316 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 RALBP11234 206 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A6P19224 532 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 ITGALP20701 1170 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 IDSP22304 550 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A1P22309 533 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A4P22310 534 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A3P35503 534 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A5P35504 534 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 SNX1Q13596 522 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 CCNG2Q16589 344 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 PHF19Q5T6S3 580 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 GPRC6AQ5T6X5 926 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 KCTD11Q693B1 232 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 DENND5AQ6IQ26 1287 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 RAB11FIP2Q7L804 512 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 B3GNT8Q7Z7M8 397 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 TRIM48Q8IWZ4 208 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 FBXO39Q8N4B4 442 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 DNAAF3Q8N9W5 541 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 ZNF248Q8NDW4 579 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 ULK4Q96C45 1275 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 DCUN1D1Q96GG9 259 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 CMKLR1Q99788 373 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A7Q9HAW7 530 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A10Q9HAW8 530 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 UGT1A8Q9HAW9 530 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 FKBPLQ9UIM3 349 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 CRLS1Q9UJA2 301 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 DNAJC16Q9Y2G8 782 aa17.39■□□□□ 0.37
HDAC4-211ENST00000494800 KMT2BQ9UMN6 2715 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 CASC3O15234 703 aaKnown RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 DUX1O43812 170 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 CEP104O60308 925 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 FGGP02679 453 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 MSNP26038 577 aaKnown RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 EIF2S3P41091 472 aaKnown RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 NFATC2Q13469 925 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 LAMB3Q13751 1172 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 SEPT6Q14141 434 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 PTPRCAPQ14761 206 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 KHDC1Q4VXA5 237 aaKnown RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 C4orf22Q6V702 233 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 PPP1R21Q6ZMI0 780 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 GSTA5Q7RTV2 222 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 AMZ2Q86W34 360 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 TAB3Q8N5C8 712 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 HEXDCQ8WVB3 486 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 CCDC97Q96F63 343 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 SLC46A1Q96NT5 459 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 TLR10Q9BXR5 811 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 RDH14Q9HBH5 336 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 PRDM8Q9NQV8 689 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 PAK5Q9P286 719 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 TMPRSS11EQ9UL52 423 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 JRKLQ9Y4A0 524 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 DNMT3AQ9Y6K1 912 aaPredicted RBP17.38■□□□□ 0.37
HDAC4-211ENST00000494800 SLC30A1Q9Y6M5 507 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 MYLKQ15746 1914 aa17.38■□□□□ 0.37
HDAC4-211ENST00000494800 IGHV1OR21-1A0A087WYE8 117 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 KLHL33A6NCF5 533 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 A6NCN8 305 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 CFAP99D6REC4 459 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 TLX3O43711 291 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-211ENST00000494800 TNFSF15O95150 251 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 EML2O95834 649 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 VIPP01282 170 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 ITGA2BP08514 1039 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 CD1CP29017 333 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 HALP42357 657 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 ABCG1P45844 678 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 ZNF140P52738 457 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-211ENST00000494800 EPHA4P54764 986 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 TMPRSS15P98073 1019 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 ZFP36L1Q07352 338 aaKnown RBP17.37■□□□□ 0.37
HDAC4-211ENST00000494800 CDH17Q12864 832 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 SQSTM1Q13501 440 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 SEPT7Q16181 437 aaKnown RBP17.37■□□□□ 0.37
HDAC4-211ENST00000494800 DRICH1Q6PGQ1 229 aaPredicted RBP17.37■□□□□ 0.37
HDAC4-211ENST00000494800 USP53Q70EK8 1073 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 SNX20Q7Z614 316 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 ZNF547Q8IVP9 402 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 OR4D9Q8NGE8 314 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 OR13C4Q8NGS5 318 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 EPB41L1Q9H4G0 881 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 RAB6BQ9NRW1 208 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 CPNE7Q9UBL6 633 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 SLC23A2Q9UGH3 650 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 LOXL2Q9Y4K0 774 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 KCTD3Q9Y597 815 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 KNTC1P50748 2209 aa17.37■□□□□ 0.37
HDAC4-211ENST00000494800 OR2AG2A6NM03 316 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-211ENST00000494800 GPR39O43194 453 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 LDB2O43679 373 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 TPH1P17752 444 aa17.36■□□□□ 0.37
HDAC4-211ENST00000494800 XRCC1P18887 633 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-211ENST00000494800 MSLNQ13421 630 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms