RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	COMTD1	Q86VU5	262 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	UNC45B	Q8IWX7	931 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	NUP93	Q8N1F7	819 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ENDOV	Q8N8Q3	282 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CLEC18C	Q8NCF0	446 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CMAS	Q8NFW8	434 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	NEK11	Q8NG66	645 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	MAGEC3	Q8TD91	643 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CLEC4C	Q8WTT0	213 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	FAM216A	Q8WUB2	273 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	HMGB4	Q8WW32	186 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	KIAA1191	Q96A73	305 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	OPTN	Q96CV9	577 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	C18orf8	Q96DM3	657 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	SLC47A1	Q96FL8	570 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ZNF333	Q96JL9	665 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CABS1	Q96KC9	395 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	SMC6	Q96SB8	1091 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	SECISBP2	Q96T21	854 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	MYD88	Q99836	296 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	SDF4	Q9BRK5	362 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	DDX23	Q9BUQ8	820 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	NUSAP1	Q9BXS6	441 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	NUF2	Q9BZD4	464 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PDE11A	Q9HCR9	933 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	POLE3	Q9NRF9	147 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	LIN7C	Q9NUP9	197 aa	Known RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ARL15	Q9NXU5	204 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	NSMCE4A	Q9NXX6	385 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	FBXO40	Q9UH90	709 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	ANAPC5	Q9UJX4	755 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	GPR34	Q9UPC5	381 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	SESN1	Q9Y6P5	492 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	PPIP5K1	Q6PFW1	1433 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	WDR19	Q8NEZ3	1342 aa		4.68	□□□□□ -1.66
CCDC66-222	ENST00000494672	VIRMA	Q69YN4	1812 aa	Known RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SBNO1	A3KN83	1393 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	C1orf232	A0A0U1RR37	186 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	MACROD2	A1Z1Q3	448 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	GOLGA8IP	A6NC78	632 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SLC9B1P1	A6NJY1	282 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	GOLGA8J	A6NMD2	632 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SLC38A8	A6NNN8	435 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	GOLGA8T	H3BQL2	631 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672		I6L893	689 aa	Predicted RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	AP3D1	O14617	1153 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	MAGEB3	O15480	346 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	LIAS	O43766	372 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	HLA-DQA2	P01906	255 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CHRNA1	P02708	482 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	EIF2S1	P05198	315 aa	Known RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	RET	P07949	1114 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	GOLGA8H	P0CJ92	632 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CTRB1	P17538	263 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	NFKBIA	P25963	317 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	PPARG	P37231	505 aa	Predicted RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	GRK6	P43250	576 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	RFX5	P48382	616 aa	Predicted RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	PCP4	P48539	62 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CYP2J2	P51589	502 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CLCN4	P51793	760 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	MAP3K7CL	P57077	242 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	GSDMD	P57764	484 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	MYL6	P60660	151 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	POLR2G	P62487	172 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	PDE1B	Q01064	536 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	RHAG	Q02094	409 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	ITGB3BP	Q13352	177 aa	Predicted RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	COTL1	Q14019	142 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SPARCL1	Q14515	664 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CASP8	Q14790	479 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	NDUFA5	Q16718	116 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	IZUMO4	Q1ZYL8	232 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	LRIT3	Q3SXY7	679 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	TDRD12	Q587J7	1177 aa	Known RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	XKR3	Q5GH77	459 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	TBC1D9B	Q66K14	1250 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CTRB2	Q6GPI1	263 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	WDR73	Q6P4I2	378 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SHQ1	Q6PI26	577 aa	Known RBP	4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CUZD1	Q86UP6	607 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	STX12	Q86Y82	276 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	WDR49	Q8IV35	697 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	TMEM217	Q8N7C4	229 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SCAI	Q8N9R8	606 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	DNAAF3	Q8N9W5	541 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	CCDC63	Q8NA47	563 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	AVL9	Q8NBF6	648 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	OR56B2P	Q8NGI1	322 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	ENKUR	Q8TC29	256 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	SLC26A7	Q8TE54	656 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	IFT81	Q8WYA0	676 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	TCEANC2	Q96MN5	208 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	TSC22D3	Q99576	134 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	NPAS1	Q99742	590 aa		4.67	□□□□□ -1.66
CCDC66-222	ENST00000494672	HAUS8	Q9BT25	410 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms