RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RAD21L1Q9H4I0 556 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 NKIRAS2Q9NYR9 191 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 C1RLQ9NZP8 487 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 CPSF2Q9P2I0 782 aaKnown RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 TSPYL4Q9UJ04 414 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 CEP164Q9UPV0 1460 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 A0A0G2JPF8 293 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 IFITM10A6NMD0 228 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 SRRM3A6NNA2 597 aaPredicted RBP4.35□□□□□ -1.71
SMC4-224ENST00000494612 HNRNPCL3B7ZW38 293 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 FAM90A26D6RGX4 464 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 TMEM189-UBE2V1I3L0A0 370 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 J3QR06 171 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 AVILO75366 819 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 DAB1O75553 588 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 DNTTP04053 509 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 ADRB2P07550 413 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 HSP90AA1P07900 732 aaKnown RBP4.35□□□□□ -1.71
SMC4-224ENST00000494612 HNRNPCL4P0DMR1 293 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 FCGR1AP12314 374 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 MYOD1P15172 320 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 HRH2P25021 359 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 NMBRP28336 390 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 TMPOP42166 694 aaKnown RBP4.35□□□□□ -1.71
SMC4-224ENST00000494612 SLC20A2Q08357 652 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 SPOCK1Q08629 439 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 UBE2V1Q13404 147 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 SLC39A14Q15043 492 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 DECR1Q16698 335 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 MEP1AQ16819 746 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 MYLK3Q32MK0 819 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 PDXDC1Q6P996 788 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 CCNI2Q6ZMN8 369 aaPredicted RBP4.35□□□□□ -1.71
SMC4-224ENST00000494612 DNAAF5Q86Y56 855 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 CEP97Q8IW35 865 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 KCTD6Q8NC69 237 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 ELP5Q8TE02 316 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 TAAR8Q969N4 342 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 LRRC59Q96AG4 307 aaKnown RBP4.35□□□□□ -1.71
SMC4-224ENST00000494612 TMEM19Q96HH6 336 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 HGH1Q9BTY7 390 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 KIFC3Q9BVG8 833 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 C1QTNF1Q9BXJ1 281 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 IL25Q9H293 177 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 GIMAP4Q9NUV9 329 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 WSB2Q9NYS7 404 aaPredicted RBP4.35□□□□□ -1.71
SMC4-224ENST00000494612 TAS2R14Q9NYV8 317 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 TTLL3Q9Y4R7 772 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 FAM169AQ9Y6X4 670 aa4.35□□□□□ -1.71
SMC4-224ENST00000494612 IGLV5-37A0A075B6J1 123 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 MAP2K7O14733 419 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 SLC16A5O15375 505 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 KCNN4O15554 427 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 DIAPH2O60879 1101 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 ZNF217O75362 1048 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 PMS2P2O95744 297 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 TRIM21P19474 475 aaKnown RBP4.34□□□□□ -1.71
SMC4-224ENST00000494612 MATR3P43243 847 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMC4-224ENST00000494612 AMPHP49418 695 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 TUBA1BP68363 451 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 TRAF2Q12933 501 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 DLG1Q12959 904 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 PRPF4BQ13523 1007 aaKnown RBP4.34□□□□□ -1.71
SMC4-224ENST00000494612 TMEM266Q2M3C6 531 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 ALS2CLQ60I27 953 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 CAPRIN2Q6IMN6 1127 aaKnown RBP4.34□□□□□ -1.71
SMC4-224ENST00000494612 BRAT1Q6PJG6 821 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 CREB3L2Q70SY1 520 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 HACE1Q8IYU2 909 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 MCUQ8NE86 351 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 SPATA22Q8NHS9 363 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 TRPC4APQ8TEL6 797 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 SLC38A5Q8WUX1 472 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 PRPF31Q8WWY3 499 aaKnown RBP4.34□□□□□ -1.71
SMC4-224ENST00000494612 PTERQ96BW5 349 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 PHF21BQ96EK2 531 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 MED30Q96HR3 178 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 CEP295NLQ96MC4 621 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 CSTL1Q9H114 145 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 SIL1Q9H173 461 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 SEMA6AQ9H2E6 1030 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 OSGEPL1Q9H4B0 414 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMC4-224ENST00000494612 WNT16Q9UBV4 365 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 HACL1Q9UJ83 578 aa4.34□□□□□ -1.71
SMC4-224ENST00000494612 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.34□□□□□ -1.71
SMC4-224ENST00000494612 ARHGEF11O15085 1522 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 FANCD2Q9BXW9 1451 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 PTPRCP08575 1304 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 hCG_1809904A0A1W2PP81 198 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 A0A1W2PPE2 198 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 A0A1W2PR64 198 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 A6NL46 340 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 HNRNPCL2B2RXH8 293 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 PLK4O00444 970 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 RFPL2O75678 378 aa4.33□□□□□ -1.72
SMC4-224ENST00000494612 GH2P01242 217 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms