RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 C11orf96Q7Z7L8 435 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 HOOK3Q86VS8 718 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 SERPINA9Q86WD7 417 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 PIANPQ8IYJ0 282 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 ARL10Q8N8L6 244 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 GPR156Q8NFN8 814 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 GLMNQ92990 594 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 MFSD3Q96ES6 412 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 SGF29Q96ES7 293 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 CCDC97Q96F63 343 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 COPS8Q99627 209 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 TRIM31Q9BZY9 425 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 ZCCHC2Q9C0B9 1178 aaKnown RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 KLC4Q9NSK0 619 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 ZDHHC3Q9NYG2 299 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 SOX13Q9UN79 622 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 APOBEC2Q9Y235 224 aaKnown RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 KCNK6Q9Y257 313 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 PCDHGA1Q9Y5H4 931 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 MYLKQ15746 1914 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 IGLV3-16A0A075B6K0 115 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 FAM187AA6NFU0 413 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 SDR42E2A6NKP2 422 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 OR2AG2A6NM03 316 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 EFCAB8A8MWE9 144 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 B4DGG1 531 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 RAD51CO43502 376 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 RFPL3O75679 317 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-208ENST00000494334 AKT1P31749 480 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 RPIAP49247 311 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 CLCNKAP51800 687 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 PRAMEP78395 509 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 DBN1Q16643 649 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 WHAMMP3Q1A5X7 153 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 INSCQ1MX18 579 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 PLA2G4EQ3MJ16 856 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 CCDC157Q569K6 752 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 ARMC3Q5W041 872 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 HIBCHQ6NVY1 386 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-208ENST00000494334 GUSBP11Q6P575 273 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 AFTPHQ6ULP2 937 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 DET1Q7L5Y6 550 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 C17orf82Q86X59 251 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-208ENST00000494334 TRAPPC5Q8IUR0 188 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 NAGSQ8N159 534 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
COL1A1-208ENST00000494334 KYQ8NBH2 561 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 OR6P1Q8NGX9 317 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 ZDHHC1Q8WTX9 485 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 NAT14Q8WUY8 206 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 HEXDCQ8WVB3 486 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 DCUN1D1Q96GG9 259 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 SIGLEC10Q96LC7 697 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 TIMM29Q9BSF4 260 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 NCKIPSDQ9NZQ3 722 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 PADI4Q9UM07 663 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
COL1A1-208ENST00000494334 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-208ENST00000494334 MAGEB16A2A368 324 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 CPED1A4D0V7 1026 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 PRR19A6NJB7 356 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 TP73O15350 636 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 SGTAO43765 313 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 EML2O95834 649 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ADRB1P08588 477 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 RALBP11234 206 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ATP1B2P14415 290 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ITGA8P53708 1063 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ILKQ13418 452 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 FASTKD1Q53R41 847 aaKnown RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 FNBP1LQ5T0N5 605 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 CASC4Q6P4E1 433 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 BEND7Q8N7W2 519 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 PATE1Q8WXA2 126 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ADAMTS14Q8WXS8 1223 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 SNF8Q96H20 258 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ZNF514Q96K75 400 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 TRIM56Q9BRZ2 755 aaKnown RBP13.34□□□□□ -0.27
COL1A1-208ENST00000494334 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 TBC1D29Q9UFV1 150 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 DNAJC16Q9Y2G8 782 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 MRFAP1Q9Y605 127 aa13.34□□□□□ -0.27
COL1A1-208ENST00000494334 FAM237BA0A1B0GVD1 139 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 MED19A0JLT2 244 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 A6NCN8 305 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 CFAP99D6REC4 459 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 SMAPO00193 183 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 SNX2O60749 519 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 VAPBO95292 243 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 TRIM16O95361 564 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms