RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IGSF8Q969P0 613 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 NMD3Q96D46 503 aaKnown RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CDK5RAP1Q96SZ6 601 aaKnown RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 MNTQ99583 582 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 GPR87Q9BY21 358 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 ULBP1Q9BZM6 244 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 UBXN6Q9BZV1 441 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 IMPG2Q9BZV3 1241 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 REXO4Q9GZR2 422 aaKnown RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 NEUROG2Q9H2A3 272 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 DEF6Q9H4E7 631 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 GSTO2Q9H4Y5 243 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 ARFGAP3Q9NP61 516 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 PNPLA8Q9NP80 782 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CISHQ9NSE2 258 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 EXOC1Q9NV70 894 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 FBXO34Q9NWN3 711 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 FBXL12Q9NXK8 326 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 DKK4Q9UBT3 224 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 SERGEFQ9UGK8 458 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 SUN2Q9UH99 717 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 GGA2Q9UJY4 613 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 NCKAP1Q9Y2A7 1128 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 A0A1B0GTQ1 180 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 DRGXA6NNA5 263 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 YJEFN3A6XGL0 299 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 TTC34A8MYJ7 566 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 E7ENQ6 273 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MID1O15344 667 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 TLX3O43711 291 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 RNASEH2AO75792 299 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 YEATS4O95619 227 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 LDOC1O95751 146 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 IGHV4-34P06331 123 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 ATP5BP06576 529 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 DLDP09622 509 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 KRT13P13646 458 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 CD19P15391 556 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 POLR2EP19388 210 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 NR2F2P24468 414 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 PSMC2P35998 433 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 ABCG1P45844 678 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 RGS7P49802 495 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 CCT8P50990 548 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 RAPGEF1Q13905 1077 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 KCNJ12Q14500 433 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 E2F5Q15329 346 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 SHBQ15464 509 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 GOLGA7BQ2TAP0 167 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 C3orf38Q5JPI3 329 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 RAB41Q5JT25 222 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 C1QL3Q5VWW1 255 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 KIAA0895LQ68EN5 471 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 NCEH1Q6PIU2 408 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MMS22LQ6ZRQ5 1243 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MMAAQ8IVH4 418 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 DHX40Q8IX18 779 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 FAM217AQ8IXS0 508 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 CFAP52Q8N1V2 620 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 ARHGAP18Q8N392 663 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 ANKRD42Q8N9B4 389 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MYRIPQ8NFW9 859 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 RNF139Q8WU17 664 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 TMEM174Q8WUU8 243 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MYEOVQ96EZ4 313 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 CNDP2Q96KP4 475 aaKnown RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 ADOQ96SZ5 270 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 OMDQ99983 421 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 HERPUD2Q9BSE4 406 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 DNAI2Q9GZS0 605 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 PCED1AQ9H1Q7 454 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MAGEF1Q9HAY2 307 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 LRRC4Q9HBW1 653 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 SGK2Q9HBY8 427 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 AURKAIP1Q9NWT8 199 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-219ENST00000494323 LUZP4Q9P127 313 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 SLCO3A1Q9UIG8 710 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 TRAF3IP3Q9Y228 551 aa5.3□□□□□ -1.56
PTCD3-219ENST00000494323 MGAQ8IWI9 3026 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF462Q96JM2 2506 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 PLXNA2O75051 1894 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3DA0A087WVF3 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3IA0A087WXS9 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3EA0A087X179 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3KA0A087X1G2 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3FA6NER0 549 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3LB9A6J9 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 C1QTNF3-AMACRE9PGA6 284 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 VILLO15195 856 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 DFNA5O60443 496 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 DNAJB5O75953 348 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 C1QL1O75973 258 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 CALCAP01258 141 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 TBC1D3HP0C7X1 549 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 CD38P28907 300 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 SLC8A1P32418 973 aa5.29□□□□□ -1.56
PTCD3-219ENST00000494323 CSKP41240 450 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms