RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CRTC3Q6UUV7 619 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 CEACAM20Q6UY09 585 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 PID1Q7Z2X4 250 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 ZC3H18Q86VM9 953 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 ZNF547Q8IVP9 402 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 KATNAL2Q8IYT4 538 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 RCOR2Q8IZ40 523 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 ZNF567Q8N184 647 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 BRSK1Q8TDC3 778 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 KIAA1143Q96AT1 154 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 MRGPRX2Q96LB1 330 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 TRIM5Q9C035 493 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 TRABDQ9H4I3 376 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 OCIAD1Q9NX40 245 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 KLHL8Q9P2G9 620 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 PDP2Q9P2J9 529 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 NFKBIL1Q9UBC1 381 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 CPNE7Q9UBL6 633 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 FAM153AQ9UHL3 310 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 LOC285095A0A1B0GVY8 99 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 PDZK1P1A8MUH7 402 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 GAPDHSO14556 408 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 CHUKO15111 745 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 CAPN5O15484 640 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 CDK14O94921 469 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 AMD1P17707 334 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 FECHP22830 423 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 WNT3AP56704 352 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 PTPRCAPQ14761 206 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 SIRPB2Q5JXA9 342 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 RAD9BQ6WBX8 426 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 BMPERQ8N8U9 685 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 NKD1Q969G9 470 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 RBM41Q96IZ5 413 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 QKIQ96PU8 341 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 PLEKHG4BQ96PX9 1271 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 TBC1D10AQ9BXI6 508 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 ZCCHC2Q9C0B9 1178 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 HACD3Q9P035 362 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 B3GALT1Q9Y5Z6 326 aa13.2□□□□□ -0.3
CTDSP1-212ENST00000494067 LILRA5A6NI73 299 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 BUD23O43709 281 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 RAD1O60671 282 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 KCNJ13O60928 360 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 IPO7O95373 1038 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 EPOP01588 193 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 BRAFP15056 766 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 ZNF7P17097 686 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 XRCC1P18887 633 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 IDSP22304 550 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 MAP4P27816 1152 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 UGT1A3P35503 534 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 CYLC1P35663 651 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 HMGCLP35914 325 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 HALP42357 657 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 ZNF75DP51815 510 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 UBE2IP63279 158 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 MC2RQ01718 297 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 ATP13A5Q4VNC0 1218 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 ANKS6Q68DC2 871 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 C11orf63Q6NUN7 778 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 ARHGAP22Q7Z5H3 698 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 SLC25A41Q8N5S1 370 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 NAT14Q8WUY8 206 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 HTR3CQ8WXA8 447 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 EXTL1Q92935 676 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 CALR3Q96L12 384 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 VPS35Q96QK1 796 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 FAM118BQ9BPY3 351 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 TIMM29Q9BSF4 260 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 FSD1LQ9BXM9 530 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 TRIT1Q9H3H1 467 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 UCK1Q9HA47 277 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 FBXO8Q9NRD0 319 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 POT1Q9NUX5 634 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 KLHL3Q9UH77 587 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 TRHDEQ9UKU6 1024 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 DNAJC16Q9Y2G8 782 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 PKP3Q9Y446 797 aa13.19□□□□□ -0.3
CTDSP1-212ENST00000494067 POLR1CO15160 346 aaPredicted RBP13.18□□□□□ -0.3
CTDSP1-212ENST00000494067 SLC28A2O43868 658 aa13.18□□□□□ -0.3
CTDSP1-212ENST00000494067 HLA-DPA1P20036 260 aa13.18□□□□□ -0.3
CTDSP1-212ENST00000494067 RBL1P28749 1068 aa13.18□□□□□ -0.3
CTDSP1-212ENST00000494067 SPAM1P38567 509 aa13.18□□□□□ -0.3
CTDSP1-212ENST00000494067 CETN2P41208 172 aa13.18□□□□□ -0.3
CTDSP1-212ENST00000494067 NAP1L1P55209 391 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms