RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GFAPP14136 432 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CTPS1P17812 591 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CDKL1Q00532 357 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
VCP-207ENST00000493886 CHSY3Q70JA7 882 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 OR6K2Q8NGY2 324 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 MYO19Q96H55 970 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 PRPF18Q99633 342 aaKnown RBP13.65□□□□□ -0.22
VCP-207ENST00000493886 GPR63Q9BZJ6 419 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 IL17CQ9P0M4 197 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 GALPQ9UBC7 116 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CROTQ9UKG9 612 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 IKZF3Q9UKT9 509 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 PKP3Q9Y446 797 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 ATP6AP2A0A1C7CYW4 349 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 LRRC14BA6NHZ5 514 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 VPS26AO75436 327 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 ATP6AP2O75787 350 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 PGLSO95336 258 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 SMIM18P0DKX4 95 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 GJA1P17302 382 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 ATP6V0D1P61421 351 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CTSL3PQ5NE16 218 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 TPGS1Q6ZTW0 290 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CPXM2Q8N436 756 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 ATP6V1E2Q96A05 226 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 SLC30A3Q99726 388 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 MAGEE1Q9HCI5 957 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CCDC167Q9P0B6 97 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 RNF112Q9ULX5 631 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CLEC4EQ9ULY5 219 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 SUPT3HB4E1H0 165 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 NRG2O14511 850 aaPredicted RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 PEX1O43933 1283 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 NIPSNAP2O75323 286 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 C8AP07357 584 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 ALPIP09923 528 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 ENPP1P22413 925 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 ME2P23368 584 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 SH3BP2P78314 561 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 XIAPP98170 497 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 TSNQ15631 228 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 CYP2R1Q6VVX0 501 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 TAS2R42Q7RTR8 314 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 LYSMD3Q7Z3D4 306 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 NKAPQ8N5F7 415 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 SNRNP27Q8WVK2 155 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 PIH1D2Q8WWB5 315 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 ACDQ96AP0 544 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 EID2BQ96D98 161 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 EVLQ9UI08 416 aaPredicted RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 RIMS3Q9UJD0 308 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 A0A1W2PRU2 124 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 PDLIM1O00151 329 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 CDK14O94921 469 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 HMGCLP35914 325 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 CLCN4P51793 760 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 LMAN2Q12907 356 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 CLPPQ16740 277 aaPredicted RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 MPPE1Q53F39 396 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 LILRA6Q6PI73 481 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 RBM44Q6ZP01 1051 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 CLYBLQ8N0X4 340 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 PGAM4Q8N0Y7 254 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 TMEM199Q8N511 208 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 OR9I1Q8NGQ6 314 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 C6orf203Q9P0P8 240 aaPredicted RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 GMPR2Q9P2T1 348 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 TRMT6Q9UJA5 497 aaKnown RBP13.64□□□□□ -0.23
VCP-207ENST00000493886 CROCCQ5TZA2 2017 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 PTPRSQ13332 1948 aa13.64□□□□□ -0.23
VCP-207ENST00000493886 CDC7O00311 574 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 PPP6CO00743 305 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 KIAA0355O15063 1070 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 UBDO15205 165 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 GPR39O43194 453 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 RNASEH2AO75792 299 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 BAIAP3O94812 1187 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CXCL14O95715 111 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CD9P21926 228 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 NME5P56597 212 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 GRM2Q14416 872 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 MPP7Q5T2T1 576 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 IL23RQ5VWK5 629 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CYHR1Q6ZMK1 362 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CCDC149Q6ZUS6 474 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 FBXO39Q8N4B4 442 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 SIDT2Q8NBJ9 832 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 ZNF784Q8NCA9 323 aaPredicted RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 NSUN5Q96P11 429 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 EFCAB1Q9HAE3 211 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms