RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ENTPD4Q9Y227 616 aa14□□□□□ -0.17
PRPF40A-211ENST00000493468 ANKUB1A6NFN9 424 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 H3BRJ5 948 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 CHUKO15111 745 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 PRPSAP2O60256 369 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 GADD45BO75293 160 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 RNF8O76064 485 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 TMEM63AO94886 807 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 CLDN7O95471 211 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 JCHAINP01591 159 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 FOLR1P15328 257 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 ZNF8P17098 575 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 MIPP30301 263 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 ITGA1P56199 1179 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 MAMLD1Q13495 774 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 GPR18Q14330 331 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 AGAP9Q5VTM2 703 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 IRGCQ6NXR0 463 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 PPP1R2P3Q6NXS1 205 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 WASH2PQ6VEQ5 465 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 MED25Q71SY5 747 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 TMEM102Q8N9M5 508 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 MARVELD3Q96A59 401 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 ZNF514Q96K75 400 aaPredicted RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 LRFN5Q96NI6 719 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 BARD1Q99728 777 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 TIMM29Q9BSF4 260 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 TDRD1Q9BXT4 1180 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 POLR1EQ9GZS1 481 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 SEPT11Q9NVA2 429 aaKnown RBP13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 ASF1BQ9NVP2 202 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 PKD2L2Q9NZM6 624 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 TMEM63CQ9P1W3 806 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 PDZD2O15018 2839 aa13.99□□□□□ -0.17
PRPF40A-211ENST00000493468 IGHV5-51A0A0C4DH38 117 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 KRT86O43790 486 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 RAB40ALP0C0E4 278 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 BRAFP15056 766 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 CA4P22748 312 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 CES1P23141 567 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 SERPINB6P35237 376 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 KLK7P49862 253 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 NAA30Q147X3 362 aaPredicted RBP13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 DPYSL2Q16555 572 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 PLEKHA7Q6IQ23 1121 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 ACAD10Q6JQN1 1059 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 LRRC49Q8IUZ0 686 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 OR8K5Q8NH50 307 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 CD180Q99467 661 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 AGPAT1Q99943 283 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 NT5MQ9NPB1 228 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 FGF21Q9NSA1 209 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 ETNK2Q9NVF9 386 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 SIK3Q9Y2K2 1263 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 CSMD2Q7Z408 3487 aa13.98□□□□□ -0.17
PRPF40A-211ENST00000493468 PIKFYVEQ9Y2I7 2098 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 C1orf232A0A0U1RR37 186 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 PDZK1P1A8MUH7 402 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 KMOO15229 486 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 PRLP01236 227 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 EBLN1P0CF75 366 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 PRF1P14222 555 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 ZNF7P17097 686 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 GRNP28799 593 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 ARL4AP40617 200 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 VAV2P52735 878 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 RRADP55042 308 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 GSDMDP57764 484 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 TUBB4BP68371 445 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 GPS2Q13227 327 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 TUBB2AQ13885 445 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 ELOAQ14241 798 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 CAMK4Q16566 473 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 INSCQ1MX18 579 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 ZNF569Q5MCW4 686 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 VWA5B1Q5TIE3 1220 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 PDPK2PQ6A1A2 396 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 D2HGDHQ8N465 521 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 MR1Q95460 341 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 PCMTD1Q96MG8 357 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 RANBP9Q96S59 729 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 TUBB2BQ9BVA1 445 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 OR2AG1Q9H205 316 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 SAMSN1Q9NSI8 373 aaKnown RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 TAB2Q9NYJ8 693 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 NFKBIL1Q9UBC1 381 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 SLC23A2Q9UGH3 650 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 AMACRQ9UHK6 382 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 SNX7Q9UNH6 387 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 B3GNT3Q9Y2A9 372 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 SETD2Q9BYW2 2564 aaPredicted RBP13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 ZFHX3Q15911 3703 aa13.97□□□□□ -0.17
PRPF40A-211ENST00000493468 SEC16AO15027 2179 aa13.96□□□□□ -0.17
PRPF40A-211ENST00000493468 AKAP9Q99996 3911 aa13.96□□□□□ -0.17
PRPF40A-211ENST00000493468 PCSK5Q92824 1860 aa13.96□□□□□ -0.17
PRPF40A-211ENST00000493468 TMEM191CA6NGB0 347 aa13.96□□□□□ -0.17
PRPF40A-211ENST00000493468 ZNF185O15231 689 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms