RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CXorf56Q9H5V9 222 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 VAT1LQ9HCJ6 419 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 NLRC4Q9NPP4 1024 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 ATP8A2Q9NTI2 1148 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 OR6C3Q9NZP0 311 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 LRFN1Q9P244 771 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 NLKQ9UBE8 527 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 SWAP70Q9UH65 585 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 RABGAP1Q9Y3P9 1069 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 CDH23Q9H251 3354 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 LAMA3Q16787 3333 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 EYSQ5T1H1 3165 aa3.22□□□□□ -1.89
PTCD3-218ENST00000493430 GRIN2DO15399 1336 aa3.21□□□□□ -1.89
PTCD3-218ENST00000493430 KIAA1549LQ6ZVL6 1849 aa3.21□□□□□ -1.89
PTCD3-218ENST00000493430 FAM90A20PA6NIJ5 464 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 C17orf100A8MU93 164 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 HNRNPCL2B2RXH8 293 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 SYT5O00445 386 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 EIF5BO60841 1220 aaKnown RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 PLEKHA8P1O95397 391 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 METTL18O95568 372 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 PAK4O96013 591 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 CRYAAP02489 173 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 MYL1P05976 194 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ZNF286BP0CG31 522 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 PDHBP11177 359 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 HOXD10P28358 340 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 MAPK4P31152 587 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 HOXA13P31271 388 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 GJC1P36383 396 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 SERPINF1P36955 418 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 MTNR1AP48039 350 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 PHEXP78562 749 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ARHGAP8P85298 464 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ECT2LQ008S8 904 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 THOC5Q13769 683 aaKnown RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 BYSLQ13895 437 aaKnown RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 BAATQ14032 418 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 IL13RA2Q14627 380 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 CDC37Q16543 378 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 AP5B1Q2VPB7 878 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ACCSLQ4AC99 568 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 SETMARQ53H47 684 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 FAM69BQ5VUD6 431 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 RRAGAQ7L523 313 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 DENND6AQ8IWF6 608 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ZNF444Q8N0Y2 327 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ENAHQ8N8S7 591 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 FAM133AQ8N9E0 248 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ZMIZ2Q8NF64 920 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 PPM1EQ8WY54 764 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 NCSTNQ92542 709 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 DUX3Q96PT4 197 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 TAAR1Q96RJ0 339 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 TRPV6Q9H1D0 765 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 TTYH1Q9H313 450 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-218ENST00000493430 PLEKHA2Q9HB19 425 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 SLC38A10Q9HBR0 1119 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 DIAPH3Q9NSV4 1193 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 SMARCAL1Q9NZC9 954 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 CCPG1Q9ULG6 757 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 ADAM18Q9Y3Q7 739 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 CLDN16Q9Y5I7 305 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 EML5Q05BV3 1969 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 TICRRQ7Z2Z1 1910 aa3.21□□□□□ -1.9
PTCD3-218ENST00000493430 RALGAPA1Q6GYQ0 2036 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 ABCB11O95342 1321 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 A0A087WV62 115 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 hDV102S1A0JD36 115 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 FAM172BPA6NC97 362 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 EPOPA6NHQ4 379 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 J3KR12 359 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 CYTH3O43739 400 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 DHX16O60231 1041 aaKnown RBP3.2□□□□□ -1.9
PTCD3-218ENST00000493430 ASGR1P07306 291 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 CHMLP26374 656 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 LIFRP42702 1097 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 SLC1A4P43007 532 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 VEGFCP49767 419 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 STAT2P52630 851 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 ZNF132P52740 706 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 ACLYP53396 1101 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 PRMT2P55345 433 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 CCL23P55773 120 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 NLRP5P59047 1200 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 SP4Q02446 784 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 KCTD2Q14681 263 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 RPE65Q16518 533 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 UBE2SQ16763 222 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 QRICH1Q2TAL8 776 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 ADCK5Q3MIX3 580 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 MCMDC2Q4G0Z9 681 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 MFSD14CQ5VZR4 134 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 ZSCAN25Q6NSZ9 544 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 SEPT14Q6ZU15 432 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 FOXL2NBQ6ZUU3 175 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 SYT13Q7L8C5 426 aa3.2□□□□□ -1.9
PTCD3-218ENST00000493430 CCDC105Q8IYK2 499 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms