RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 NADK2Q4G0N4 442 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 CPZQ66K79 652 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 TIGD7Q6NT04 549 aaPredicted RBP13.47□□□□□ -0.25
SAMM50-204ENST00000493161 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 CERS6Q6ZMG9 384 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 PRSS42Q7Z5A4 293 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 TRIM48Q8IWZ4 208 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 KLHL6Q8WZ60 621 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 TRIM11Q96F44 468 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 TSGA13Q96PP4 275 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 ACTL8Q9H568 366 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 SLC40A1Q9NP59 571 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 LHX9Q9NQ69 397 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 ANAPC7Q9UJX3 599 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 KCND3Q9UK17 655 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 PADI1Q9ULC6 663 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 VPS4AQ9UN37 437 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 SHOC2Q9UQ13 582 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
SAMM50-204ENST00000493161 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
SAMM50-204ENST00000493161 ICE1Q9Y2F5 2266 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 RGSL1A5PLK6 1076 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 PDZK1P1A8MUH7 402 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 KCNK1O00180 336 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 JCHAINP01591 159 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 SLC4A1P02730 911 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 CCNYL3P0C7X3 344 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 FOLR1P15328 257 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 CASP14P31944 242 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 SSR1P43307 286 aaKnown RBP13.46□□□□□ -0.25
SAMM50-204ENST00000493161 CAPZBP47756 277 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 ZBTB17Q13105 803 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 SEMA5AQ13591 1074 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.46□□□□□ -0.25
SAMM50-204ENST00000493161 ZNF569Q5MCW4 686 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 PWWP2BQ6NUJ5 590 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 APLFQ8IW19 511 aaPredicted RBP13.46□□□□□ -0.25
SAMM50-204ENST00000493161 PQLC3Q8N755 202 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 CNTD1Q8N815 330 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 AVL9Q8NBF6 648 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 GALNT11Q8NCW6 608 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 CPT1CQ8TCG5 803 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 FATE1Q969F0 183 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 TRIB3Q96RU7 358 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 NUP85Q9BW27 656 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 IP6K2Q9UHH9 426 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 TMPRSS11EQ9UL52 423 aa13.46□□□□□ -0.25
SAMM50-204ENST00000493161 UNC79Q9P2D8 2635 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 MTA2O94776 668 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 NELFEP18615 380 aaKnown RBP13.45□□□□□ -0.26
SAMM50-204ENST00000493161 CA4P22748 312 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 LAMB3Q13751 1172 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 PRR30Q53SZ7 412 aaPredicted RBP13.45□□□□□ -0.26
SAMM50-204ENST00000493161 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 FHL5Q5TD97 284 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 HGSNATQ68CP4 663 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 ABRAXAS1Q6UWZ7 409 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 C11orf96Q7Z7L8 435 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 LRRTM4Q86VH4 590 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 PPP1R3BQ86XI6 285 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 NAP1L5Q96NT1 182 aaPredicted RBP13.45□□□□□ -0.26
SAMM50-204ENST00000493161 CEP41Q9BYV8 373 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 AMACRQ9UHK6 382 aa13.45□□□□□ -0.26
SAMM50-204ENST00000493161 A1L4Q6 167 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 KMOO15229 486 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 RECKO95980 971 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 CYP1A2P05177 515 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 TAS2R40P59535 323 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 TUBB3Q13509 450 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 IL10RAQ13651 578 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 CLEC17AQ6ZS10 378 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 TMC3Q7Z5M5 1100 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 TRAM1L1Q8N609 369 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 KCTD6Q8NC69 237 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 CCNYQ8ND76 341 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 GPR150Q8NGU9 434 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 SSC4DQ8WTU2 575 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 ZDHHC12Q96GR4 267 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 SLC41A2Q96JW4 573 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 TIMM29Q9BSF4 260 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 ZSCAN5AQ9BUG6 496 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 LUZP4Q9P127 313 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 EPHA6Q9UF33 1036 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 ZNF711Q9Y462 761 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 MAP4K5Q9Y4K4 846 aa13.44□□□□□ -0.26
SAMM50-204ENST00000493161 ARGFXA6NJG6 315 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 GPR89AB7ZAQ6 455 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 C21orf140B9A014 251 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 AURKAO14965 403 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 SORBS2O94875 1100 aaKnown RBP13.43□□□□□ -0.26
SAMM50-204ENST00000493161 CDK14O94921 469 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 EBLN1P0CF75 366 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 GPR89BP0CG08 455 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms