RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 GIMD1P0DJR0 217 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 GSTT1P30711 240 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 SLC26A3P40879 764 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 RASGEF1CQ8N431 466 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
TRIM11-204ENST00000493030 RASSF1Q9NS23 344 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 TCAF1Q9Y4C2 921 aa13.53□□□□□ -0.24
TRIM11-204ENST00000493030 SOWAHBA6NEL2 793 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 C9JVG2 144 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 ZBTB48P10074 688 aaPredicted RBP13.52□□□□□ -0.24
TRIM11-204ENST00000493030 CCT3P49368 545 aaKnown RBP13.52□□□□□ -0.24
TRIM11-204ENST00000493030 IL23RQ5VWK5 629 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 HPS6Q86YV9 775 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 NRSN1Q8IZ57 195 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 METTL21AQ8WXB1 218 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 HERVK_113Q902F9 699 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 PSMG2Q969U7 264 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 HNRNPABQ99729 332 aaKnown RBP13.52□□□□□ -0.24
TRIM11-204ENST00000493030 CACNG4Q9UBN1 327 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 ERVW-1Q9UQF0 538 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 KDM4FA0A1W2PPD8 638 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 SLC31A1O15431 190 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 COL6A2P12110 1019 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 ILF3Q12906 894 aaKnown RBP eCLIP13.52□□□□□ -0.24
TRIM11-204ENST00000493030 NDUFA9Q16795 377 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 RGS21Q2M5E4 152 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 FAM91A1Q658Y4 838 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 PTCD2Q8WV60 388 aaKnown RBP13.52□□□□□ -0.24
TRIM11-204ENST00000493030 TRNT1Q96Q11 434 aaKnown RBP13.52□□□□□ -0.24
TRIM11-204ENST00000493030 SLC25A51Q9H1U9 297 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 NECTIN3Q9NQS3 549 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 PCDHGC3Q9UN70 934 aa13.52□□□□□ -0.24
TRIM11-204ENST00000493030 PER2O15055 1255 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 TCEA3O75764 348 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 POP4O95707 220 aaKnown RBP13.52□□□□□ -0.25
TRIM11-204ENST00000493030 GOT2P00505 430 aaKnown RBP13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PTPN2P17706 415 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 VWA5B1Q5TIE3 1220 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.25
TRIM11-204ENST00000493030 SERPINA9Q86WD7 417 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 TFAP2BQ92481 460 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 NMUR2Q9GZQ4 415 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 ZNF222Q9UK12 451 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 IKZF2Q9UKS7 526 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 MFHAS1Q9Y4C4 1052 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 MYO5BQ9ULV0 1848 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 MYOM1P52179 1685 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 FAM86C2PA6NEL3 165 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 MATN3O15232 486 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 LAMP2P13473 410 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 MTHFRP42898 656 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 CAP1Q01518 475 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 SLC1A5Q15758 541 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 ANKRD22Q5VYY1 191 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 ESRP1Q6NXG1 681 aaKnown RBP13.52□□□□□ -0.25
TRIM11-204ENST00000493030 OAFQ86UD1 273 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 CCDC177Q9NQR7 707 aaPredicted RBP13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PHF11Q9UIL8 331 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 FBXW2Q9UKT8 454 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 FOXO6A8MYZ6 492 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 OR1F1O43749 312 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 NOL4O94818 638 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PCDH1Q08174 1060 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PPIGQ13427 754 aaKnown RBP eCLIP13.52□□□□□ -0.253e-6■■■□□ 16
TRIM11-204ENST00000493030 LRRC73Q5JTD7 316 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PEX5LQ8IYB4 626 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 UBR7Q8N806 425 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 CNPPD1Q9BV87 410 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 MAGEH1Q9H213 219 aa13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.25
TRIM11-204ENST00000493030 PGRMC2O15173 223 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 NMBRP28336 390 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CMPK1P30085 196 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 L1CAMP32004 1257 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 MASP1P48740 699 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CLCQ05315 142 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 RFTN2Q52LD8 501 aaPredicted RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 JAZF1Q86VZ6 243 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 TBC1D21Q8IYX1 336 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 LCN9Q8WX39 176 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CLEC4AQ9UMR7 237 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ATRNO75882 1429 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 C3P01024 1663 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 STX16O14662 325 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CAPGP40121 348 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ASMTP46597 345 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 MAPK12P53778 367 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ARF5P84085 180 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 LPCAT4Q643R3 524 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 RBM44Q6ZP01 1051 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 FAM47BQ8NA70 645 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ZMIZ2Q8NF64 920 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ZNF483Q8TF39 744 aaPredicted RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 FCRL4Q96PJ5 515 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms