RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CADM1Q9BY67 442 aaKnown RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 MMADHCQ9H3L0 296 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 WDR55Q9H6Y2 383 aaPredicted RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 SARS2Q9NP81 518 aaKnown RBP13.9□□□□□ -0.18
PTPN7-216ENST00000492977 RAD18Q9NS91 495 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 ZDHHC3Q9NYG2 299 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 PKD2L2Q9NZM6 624 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 IKZF3Q9UKT9 509 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 PLA2G4CQ9UP65 541 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 TRAF6Q9Y4K3 522 aa13.9□□□□□ -0.18
PTPN7-216ENST00000492977 GOLGA8QA0A0J9YX86 632 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 GOLGA8OA6NCC3 632 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 NPEPPSL1A6NEC2 478 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 IQCF5A8MTL0 148 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 UPK3BL1B0FP48 263 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 UPK3BL2E5RIL1 263 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 GOLGA8NF8WBI6 632 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 FGF4P08620 206 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 C1SP09871 688 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 TIMP2P16035 220 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 CA5AP35218 305 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 NSG1P42857 185 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 RGS4P49798 205 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 KDSRQ06136 332 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 PDCD2Q16342 344 aaPredicted RBP13.89□□□□□ -0.19
PTPN7-216ENST00000492977 ZNF805Q5CZA5 627 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 GPSM1Q86YR5 675 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 ARHGAP24Q8N264 748 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 CPSF7Q8N684 471 aaKnown RBP13.89□□□□□ -0.19
PTPN7-216ENST00000492977 ACTRT2Q8TDY3 377 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 MRPL38Q96DV4 380 aaKnown RBP13.89□□□□□ -0.19
PTPN7-216ENST00000492977 EBF3Q9H4W6 596 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 MEAF6Q9HAF1 191 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 LATS2Q9NRM7 1088 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 MRGBPQ9NV56 204 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 KLHL42Q9P2K6 505 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 DEC1Q9P2X7 70 aa13.89□□□□□ -0.19
PTPN7-216ENST00000492977 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 EPOPA6NHQ4 379 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SDHDO14521 159 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 NEMP1O14524 444 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 UBFD1O14562 309 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 DCXO43602 365 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SLC25A14O95258 325 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ATP6V1G2O95670 118 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 DGKAP23743 735 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 INHBCP55103 352 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 DCDC1P59894 354 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SEMG2Q02383 582 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 KLF10Q13118 480 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 EIF4HQ15056 248 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SNCBQ16143 134 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 GAB4Q2WGN9 574 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ANKS6Q68DC2 871 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 RPS27LQ71UM5 84 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 GET4Q7L5D6 327 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ADAMTSL2Q86TH1 951 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SUGP1Q8IWZ8 645 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CLYBLQ8N0X4 340 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CEP70Q8NHQ1 597 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 MCUR1Q96AQ8 359 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PHOX2BQ99453 314 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 COPS8Q99627 209 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 TMUB1Q9BVT8 246 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PRSS21Q9Y6M0 314 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 IGLV3-16A0A075B6K0 115 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 RGSL1A5PLK6 1076 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 MAGEC1O60732 1142 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 WFS1O76024 890 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SIX3O95343 332 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 JUNP05412 331 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CTSLP07711 333 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 RPS17P08708 135 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 XPAP23025 273 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 EEF1DP29692 281 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CPA2P48052 419 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SLC6A11P48066 632 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 COPAP53621 1224 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 BTKQ06187 659 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 NAA25Q14CX7 972 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ATP13A5Q4VNC0 1218 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 GPRC6AQ5T6X5 926 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 NXNQ6DKJ4 435 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CLDN19Q8N6F1 224 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 RBM15BQ8NDT2 890 aaKnown RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 FAM13CQ8NE31 585 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 CCDC97Q96F63 343 aaPredicted RBP13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ZFYVE19Q96K21 471 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PPP1R36Q96LQ0 422 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PANX3Q96QZ0 392 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ZNF385DQ9H6B1 395 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 ZFP14Q9HCL3 533 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 TNFRSF12AQ9NP84 129 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 PCDH12Q9NPG4 1184 aa13.88□□□□□ -0.19
PTPN7-216ENST00000492977 SPATS2LQ9NUQ6 558 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms