RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 MRGPRX2Q96LB1 330 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 VAT1Q99536 393 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 GORASP1Q9BQQ3 440 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 TMEM121Q9BTD3 319 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 DPH1Q9BZG8 443 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 STRADBQ9C0K7 418 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 TMEM9Q9P0T7 183 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 FEZ2Q9UHY8 353 aaPredicted RBP12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 KCNK6Q9Y257 313 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 LOXL2Q9Y4K0 774 aa12.55□□□□□ -0.4
SEC61A1-206ENST00000491668 IGHV1OR21-1A0A087WYE8 117 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 PRR19A6NJB7 356 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 EFSO43281 561 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 NUAK1O60285 661 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 PHF2O75151 1096 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SLC4A1P02730 911 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 CCL4P13236 92 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 ACP5P13686 325 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 STIP1P31948 543 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 GPR3P46089 330 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 FASLGP48023 281 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 ARSDP51689 593 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SRSF6Q13247 344 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SQSTM1Q13501 440 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SIX1Q15475 284 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 TGIF1Q15583 401 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SIRPB2Q5JXA9 342 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 IYDQ6PHW0 289 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 CHST15Q7LFX5 561 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 GPR155Q7Z3F1 870 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 ADGRG6Q86SQ4 1221 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF547Q8IVP9 402 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 TTC30BQ8N4P2 665 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 RCBTB1Q8NDN9 531 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SNRNP27Q8WVK2 155 aaKnown RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 PMEPA1Q969W9 287 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 UBL7Q96S82 380 aaPredicted RBP12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 OR2AG1Q9H205 316 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 FOXJ2Q9P0K8 574 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 PISDQ9UG56 409 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 SLC23A2Q9UGH3 650 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 FAM153AQ9UHL3 310 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 ACSL6Q9UKU0 697 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 TRHDEQ9UKU6 1024 aa12.54□□□□□ -0.4
SEC61A1-206ENST00000491668 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 PRAMEF33A0A0G2JMD5 474 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 C9orf172C9J069 976 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 CHUKO15111 745 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 ATXN7O15265 892 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 NVLO15381 856 aaKnown RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 GRID2O43424 1007 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 PRAMEF10O60809 474 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 MTX2O75431 263 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 C1QL1O75973 258 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 EPOP01588 193 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 MPSTP25325 297 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 TNNT3P45378 269 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 KCNJ1P48048 391 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 TMPRSS3P57727 454 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 WHAMMP3Q1A5X7 153 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 PHF19Q5T6S3 580 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 ITPRIPL1Q6GPH6 555 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 CCDC137Q6PK04 289 aaKnown RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 ARHGEF18Q6ZSZ5 1173 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 PIM3Q86V86 326 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 KLHL7Q8IXQ5 586 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 TRAM1L1Q8N609 369 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 MNS1Q8NEH6 495 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 GRK7Q8WTQ7 553 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 GLYATL1Q969I3 302 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 RUNDC3BQ96NL0 473 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 FCRL5Q96RD9 977 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 ZSCAN5AQ9BUG6 496 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 SPATA16Q9BXB7 569 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 GPR63Q9BZJ6 419 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 TRIM39Q9HCM9 518 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 BPIFA1Q9NP55 256 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 SCHIP1Q9P0W5 487 aaPredicted RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 RSPH14Q9UHP6 348 aa12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 DRG1Q9Y295 367 aaKnown RBP12.53□□□□□ -0.4
SEC61A1-206ENST00000491668 CCDC188H7C350 402 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 GAPDHSO14556 408 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 GPR39O43194 453 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC25A14O95258 325 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 GAS8O95995 478 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 PRB1P04280 392 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 JMJD7P0C870 316 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 HMGCLP35914 325 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 FNTAP49354 379 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 LIMK2P53671 638 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 PRPSAP1Q14558 356 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 OASLQ15646 514 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms