RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ITGAL	P20701	1170 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	CASQ1	P31415	396 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	HADHA	P40939	763 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	PTGIR	P43119	386 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	RPIA	P49247	311 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	FNTA	P49354	379 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	MRPS25	P82663	173 aa	Known RBP	18.31	■□□□□ 0.52
C4A-256	ENST00000490663	B4GALNT1	Q00973	533 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
C4A-256	ENST00000490663	LDLRAP1	Q5SW96	308 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	TSTD2	Q5T7W7	516 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	OGFOD3	Q6PK18	319 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	CES3	Q6UWW8	571 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	C4orf22	Q6V702	233 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	TAS2R42	Q7RTR8	314 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	C11orf96	Q7Z7L8	435 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	PIANP	Q8IYJ0	282 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	NXPE1	Q8N323	547 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	MPP5	Q8N3R9	675 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	SDR16C5	Q8N3Y7	309 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	PPHLN1	Q8NEY8	458 aa	Known RBP	18.31	■□□□□ 0.52
C4A-256	ENST00000490663	TTC25	Q96NG3	672 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	TRIM56	Q9BRZ2	755 aa	Known RBP	18.31	■□□□□ 0.52
C4A-256	ENST00000490663	RMI1	Q9H9A7	625 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	PRDM8	Q9NQV8	689 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	SMOX	Q9NWM0	555 aa		18.31	■□□□□ 0.52
C4A-256	ENST00000490663	ACACB	O00763	2458 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	18.3	■□□□□ 0.52
C4A-256	ENST00000490663	HEATR9	A2RTY3	570 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	AGRP	O00253	132 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	KMO	O15229	486 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	NMBR	P28336	390 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	ETF1	P62495	437 aa	Known RBP	18.3	■□□□□ 0.52
C4A-256	ENST00000490663	FNBP1L	Q5T0N5	605 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	TMEM220	Q6QAJ8	160 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	TMPRSS7	Q7RTY8	843 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	SNX20	Q7Z614	316 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	SERPINA9	Q86WD7	417 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	ARL14	Q8N4G2	192 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	SLC37A2	Q8TED4	501 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	GRK7	Q8WTQ7	553 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	HDAC10	Q969S8	669 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	SGF29	Q96ES7	293 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	RANBP9	Q96S59	729 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	CHRAC1	Q9NRG0	131 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	EVA1B	Q9NVM1	165 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	ASIC3	Q9UHC3	531 aa		18.3	■□□□□ 0.52
C4A-256	ENST00000490663	GOT2	P00505	430 aa	Known RBP	18.29	■□□□□ 0.52
C4A-256	ENST00000490663	ADRA1D	P25100	572 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	FOXN2	P32314	431 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	DRG2	P55039	364 aa	Known RBP	18.29	■□□□□ 0.52
C4A-256	ENST00000490663	CCL7	P80098	99 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	SHC2	P98077	582 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	FOXK2	Q01167	660 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	C2orf54	Q08AI8	447 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	ILK	Q13418	452 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	LRP8	Q14114	963 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	SEMA3A	Q14563	771 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	DBN1	Q16643	649 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	18.29	■□□□□ 0.52
C4A-256	ENST00000490663	CAND1	Q86VP6	1230 aa	Known RBP	18.29	■□□□□ 0.52
C4A-256	ENST00000490663	DTX3L	Q8TDB6	740 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	NAT6	Q93015	286 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	NCKIPSD	Q9NZQ3	722 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	SCHIP1	Q9P0W5	487 aa	Predicted RBP	18.29	■□□□□ 0.52
C4A-256	ENST00000490663	LRIT1	Q9P2V4	623 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	NEUROG3	Q9Y4Z2	214 aa		18.29	■□□□□ 0.52
C4A-256	ENST00000490663	PCM1	Q15154	2024 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	C1QTNF9B	B2RNN3	333 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663		H7C0S8	307 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	TTI1	O43156	1089 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	SGTA	O43765	313 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	C1QTNF9	P0C862	333 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	RPL10	P27635	214 aa	Known RBP	18.28	■□□□□ 0.52
C4A-256	ENST00000490663	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.28	■□□□□ 0.52
C4A-256	ENST00000490663	PTK6	Q13882	451 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	NFE2L1	Q14494	772 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	SKIDA1	Q1XH10	827 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	LRRC8B	Q6P9F7	803 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	LDB1	Q86U70	411 aa	Predicted RBP	18.28	■□□□□ 0.52
C4A-256	ENST00000490663	OR6P1	Q8NGX9	317 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	TIMM29	Q9BSF4	260 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	ZCCHC2	Q9C0B9	1178 aa	Known RBP	18.28	■□□□□ 0.52
C4A-256	ENST00000490663	ABCG4	Q9H172	646 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	18.28	■□□□□ 0.52
C4A-256	ENST00000490663	PSMD13	Q9UNM6	376 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	PCDHB1	Q9Y5F3	818 aa		18.28	■□□□□ 0.52
C4A-256	ENST00000490663	TRBV5-4	A0A0C4DH59	114 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PRAMEF33	A0A0G2JMD5	474 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663		A0A1W2PQM1	296 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663		A6NCN8	305 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	AGAP14	A8MT82	685 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PDZK1P1	A8MUH7	402 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PPM1D	O15297	605 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	BANF1	O75531	89 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	POP7	O75817	140 aa	Known RBP	18.27	■□□□□ 0.52
C4A-256	ENST00000490663	MT-CO3	P00414	261 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	RPLP0	P05388	317 aa	Known RBP	18.27	■□□□□ 0.52
C4A-256	ENST00000490663	GP1BA	P07359	652 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	F7	P08709	466 aa	Predicted RBP	18.27	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms