RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 UCMAQ8WVF2 138 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 TFAP2BQ92481 460 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 TFAP2CQ92754 450 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 KAT5Q92993 513 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 CD101Q93033 1021 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 CENPTQ96BT3 561 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 C18orf8Q96DM3 657 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 ZFYVE19Q96K21 471 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 SLC22A12Q96S37 553 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 NDC1Q9BTX1 674 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.78□□□□□ -1.64
CSTF1-205ENST00000490539 BBS2Q9BXC9 721 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 PACSIN1Q9BY11 444 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 FAM126AQ9BYI3 521 aaPredicted RBP4.78□□□□□ -1.64
CSTF1-205ENST00000490539 REXO4Q9GZR2 422 aaKnown RBP4.78□□□□□ -1.64
CSTF1-205ENST00000490539 CNOT10Q9H9A5 744 aaKnown RBP4.78□□□□□ -1.64
CSTF1-205ENST00000490539 LMAN1LQ9HAT1 526 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 LTB4R2Q9NPC1 389 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 SPHK2Q9NRA0 654 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 LANCL2Q9NS86 450 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 TMEM140Q9NV12 185 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 GTSE1Q9NYZ3 720 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 DEC1Q9P2X7 70 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 RAB23Q9ULC3 237 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 SLC8A2Q9UPR5 921 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 CCL26Q9Y258 94 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 NME7Q9Y5B8 376 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 KALRNO60229 2985 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 OTOGLQ3ZCN5 2332 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 IGF2RP11717 2491 aa4.78□□□□□ -1.64
CSTF1-205ENST00000490539 GOLGA6L7A0A1B0GV03 622 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TBC1D3BA6NDS4 549 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 YJEFN3A6XGL0 299 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TMCO5BA8MYB1 307 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 E5RJQ4 531 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 E7ENQ6 273 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 E7EVH7 732 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 NEDD8-MDP1E9PL57 170 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 H0YHG0 523 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 MYO1FO00160 1098 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TRDMT1O14717 391 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CHUKO15111 745 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 NPC1O15118 1278 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TIMM44O43615 452 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 FAM20BO75063 409 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 PPFIA2O75334 1257 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TBX18O95935 607 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CALB1P05937 261 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 H2AFZP0C0S5 128 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 OSMP13725 252 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 ARSAP15289 507 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TNFAIP3P21580 790 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CD72P21854 359 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CORO1AP31146 461 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CCR1P32246 355 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CTNNA1P35221 906 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 NNMTP40261 264 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TNFRSF4P43489 277 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 MTNR1BP49286 362 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 SLC16A1P53985 500 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TBX4P57082 545 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 RNASE9P60153 205 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 DGCR2P98153 550 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CDR2Q01850 454 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 ZNF844Q08AG5 666 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 BYSLQ13895 437 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 MPPE1Q53F39 396 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 EOGTQ5NDL2 527 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 LY6G5CQ5SRR4 150 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 PRAMEF14Q5SWL7 426 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 FAM102AQ5T9C2 384 aaPredicted RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 DENND1BQ6P3S1 775 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 ALKBH5Q6P6C2 394 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 DCUN1D2Q6PH85 259 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CCDC121Q6ZUS5 278 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 H2AFVQ71UI9 128 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 GPRIN1Q7Z2K8 1008 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 PEX26Q7Z412 305 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CROCCP2Q86T23 111 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 NT5DC3Q86UY8 548 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 HOOK3Q86VS8 718 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 DENND1CQ8IV53 801 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 PQLC1Q8N2U9 271 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 SPEM1Q8N4L4 309 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 ATP6V0D2Q8N8Y2 350 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 MAGEC3Q8TD91 643 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TLCD1Q96CP7 247 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TMA16Q96EY4 203 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 HES6Q96HZ4 224 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 BTN2A3PQ96KV6 586 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 NAP1L3Q99457 506 aaPredicted RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 DDX23Q9BUQ8 820 aaKnown RBP4.77□□□□□ -1.65
CSTF1-205ENST00000490539 SLC2A11Q9BYW1 496 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 TXLNGYQ9BZA5 131 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 RAB17Q9H0T7 212 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 SMOC2Q9H3U7 446 aa4.77□□□□□ -1.65
CSTF1-205ENST00000490539 RABEP2Q9H5N1 569 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms