RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CRADDP78560 199 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 PTSQ03393 145 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 DHX9Q08211 1270 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 CDH17Q12864 832 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 HLTFQ14527 1009 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 CASP8Q14790 479 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 TCEA2Q15560 299 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 HIF1AQ16665 826 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 ISXQ2M1V0 245 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 PERM1Q5SV97 790 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 KCTD16Q68DU8 428 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 OGFOD3Q6PK18 319 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 ADAMTSL4Q6UY14 1074 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 RBM44Q6ZP01 1051 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 MICALCLQ6ZW33 695 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 TMC3Q7Z5M5 1100 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 LINC00523Q86TU6 105 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 RELL1Q8IUW5 271 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 LSMEM2Q8N112 164 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 AP2M1Q96CW1 435 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 EID2BQ96D98 161 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 FMO2Q99518 471 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 CCDC3Q9BQI4 270 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 FSD1LQ9BXM9 530 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 GSDMCQ9BYG8 508 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 FRMD8Q9BZ67 464 aaPredicted RBP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 FOXP3Q9BZS1 431 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 TSPYL1Q9H0U9 437 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 TMEM168Q9H0V1 697 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 ABCG8Q9H221 673 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 CARS2Q9HA77 564 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 ZNF446Q9NWS9 450 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 TRNAU1APQ9NX07 287 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 SYBUQ9NX95 663 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 SIRPGQ9P1W8 387 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 SLC17A4Q9Y2C5 497 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 GPSM3Q9Y4H4 160 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 PCDHB1Q9Y5F3 818 aa10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-208ENST00000489554 APC2O95996 2303 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 PKD1L2Q7Z442 2459 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 A0A087WV48 116 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 C1orf232A0A0U1RR37 186 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 RGSL1A5PLK6 1076 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 ANKRD66B4E2M5 251 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 AURKAO14965 403 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 EIF3HO15372 352 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 BRINP1O60477 761 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 C1QAP02745 245 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 CEACAM5P06731 702 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 IVLP07476 585 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 PIRTP0C851 137 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 PSMA3P25788 255 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 LMAN1P49257 510 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 ARL4CP56559 192 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 SESN2P58004 480 aaPredicted RBP10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 ILF3Q12906 894 aaKnown RBP eCLIP10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 PEX6Q13608 980 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 SPIDRQ14159 915 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 PPP1R21Q6ZMI0 780 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 CEP128Q6ZU80 1094 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 TTC30BQ8N4P2 665 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 FAM46DQ8NEK8 389 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 GPR156Q8NFN8 814 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 SNIP1Q8TAD8 396 aaKnown RBP10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 GPBAR1Q8TDU6 330 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 CCDC74AQ96AQ1 378 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 ZNF778Q96MU6 729 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 DPEP2Q9H4A9 486 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 POLR1BQ9H9Y6 1135 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 PKD2L2Q9NZM6 624 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 CD84Q9UIB8 345 aa10.46□□□□□ -0.73
SCAMP4-208ENST00000489554 WDFY3Q8IZQ1 3526 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 FREM2Q5SZK8 3169 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 ACACAQ13085 2346 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 MROH6A6NGR9 719 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 B4DGG1 531 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 NTN3O00634 580 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 RRP8O43159 456 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 LDB2O43679 373 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 NOBOXO60393 691 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 DXOO77932 396 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 CLDN7O95471 211 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SOD1P00441 154 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 PNLIPP16233 465 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 GLB1P16278 677 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 ELK3P41970 407 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 GNPDA1P46926 289 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 LSSP48449 732 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 NPY2RP49146 381 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SPINT3P49223 89 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 GPX6P59796 221 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 GABREP78334 506 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 GABPB1Q06547 395 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 PDIA2Q13087 525 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 UAP1Q16222 522 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 TBC1D25Q3MII6 688 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 BBS9Q3SYG4 887 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 C14orf28Q4W4Y0 310 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms