RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 CFAP97Q9P2B7 532 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 GPR25O00155 361 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 NOBOXO60393 691 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 AZGP1P25311 298 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 HNMTP50135 292 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 SRSF11Q05519 484 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 DQX1Q8TE96 717 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 HMCESQ96FZ2 354 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 MFHAS1Q9Y4C4 1052 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 C1RP00736 705 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 PARP15Q460N3 678 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.48■□□□□ 0.396e-10■■■■■ 48.2
NPHP4-209ENST00000489180 TMEM214Q6NUQ4 689 aaKnown RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF730Q6ZMV8 503 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 KCTD8Q6ZWB6 473 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 FSTL5Q8N475 847 aaPredicted RBP17.48■□□□□ 0.39
NPHP4-209ENST00000489180 OR10A6Q8NH74 314 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 SIX2Q9NPC8 291 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 KCTD5Q9NXV2 234 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 ITGB1BP2Q9UKP3 347 aa17.48■□□□□ 0.39
NPHP4-209ENST00000489180 CLDN9O95484 217 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 MMP3P08254 477 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 MXD1Q05195 221 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 MBTD1Q05BQ5 628 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CA9Q16790 459 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 HKDC1Q2TB90 917 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 RGL4Q8IZJ4 473 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CENPNQ96H22 339 aaPredicted RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 FEM1AQ9BSK4 669 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 OSER1Q9NX31 292 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 STK16O75716 305 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CCNCP24863 283 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CCR3P51677 355 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 OLR1P78380 273 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 C2orf80Q0P641 193 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 SLC9B1Q4ZJI4 515 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 METTL21CQ5VZV1 264 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CHSY3Q70JA7 882 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CLIP4Q8N3C7 705 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 DIRAS2Q96HU8 199 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CXorf21Q9HAI6 301 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 SSU72Q9NP77 194 aaKnown RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 GALNT8Q9NY28 637 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 KIAA1522Q9P206 1035 aaPredicted RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 COL20A1Q9P218 1284 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 EIF2B4Q9UI10 523 aaKnown RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 POMPQ9Y244 141 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 UGT2B4P06133 528 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 PRDX6P30041 224 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 ARL2P36404 184 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 PUDPQ08623 228 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 LCP2Q13094 533 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 MPPE1Q53F39 396 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 TDRPQ86YL5 185 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 PIGKQ92643 395 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 PCDHGC4Q9Y5F7 938 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 TSPAN1O60635 241 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 FGBP02675 491 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 RLN1P04808 185 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 CLCNKBP51801 687 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF132P52740 706 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 GCNT6Q5T4J0 391 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 PGBD2Q6P3X8 592 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 PTCD2Q8WV60 388 aaKnown RBP17.47■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF354BQ96LW1 612 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 MARCH7Q9H992 704 aa17.47■□□□□ 0.39
NPHP4-209ENST00000489180 URADA6NGE7 173 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 CLDN11O75508 207 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ZBTB6Q15916 424 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 POMZP3Q6PJE2 187 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ZDHHC24Q6UX98 284 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 CLEC4CQ8WTT0 213 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 KCNS3Q9BQ31 491 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ZNF221Q9UK13 617 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 OR2AG2A6NM03 316 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 NOS1APO75052 506 aaPredicted RBP17.46■□□□□ 0.39
NPHP4-209ENST00000489180 NDST3O95803 873 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 CACNG1Q06432 222 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 NAE1Q13564 534 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ZFP69Q49AA0 526 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 C17orf64Q86WR6 236 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 DAW1Q8N136 415 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 UBE2J2Q8N2K1 259 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 STYXQ8WUJ0 223 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 GTPBP3Q969Y2 492 aaKnown RBP17.46■□□□□ 0.39
NPHP4-209ENST00000489180 EXOSC8Q96B26 276 aaKnown RBP17.46■□□□□ 0.39
NPHP4-209ENST00000489180 BCAS3Q9H6U6 928 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 PCDHB1Q9Y5F3 818 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 ARHGEF33A8MVX0 844 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 TOR1BO14657 336 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 UROSP10746 265 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 TACR2P21452 398 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 TUSC3Q13454 348 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 KCNA10Q16322 511 aa17.46■□□□□ 0.39
NPHP4-209ENST00000489180 METTL3Q86U44 580 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms