RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 OSGEPL1Q9H4B0 414 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 TMEM9Q9P0T7 183 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 SCHIP1Q9P0W5 487 aaPredicted RBP24.64■■□□□ 1.54
HMGN1-217ENST00000489072 GUCA1BQ9UMX6 200 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 PKP3Q9Y446 797 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 KCTD3Q9Y597 815 aa24.64■■□□□ 1.54
HMGN1-217ENST00000489072 GLYATL1P3A0A0U1RQE8 302 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 JMJD7P0C870 316 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 SLC5A2P31639 672 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 TMEM115Q12893 351 aaPredicted RBP24.63■■□□□ 1.53
HMGN1-217ENST00000489072 NFATC2Q13469 925 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 SPARCL1Q14515 664 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 DENND5AQ6IQ26 1287 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 C11orf96Q7Z7L8 435 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 RCBTB1Q8NDN9 531 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 GDAP1Q8TB36 358 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 SLC35B2Q8TB61 432 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 TMEM159Q96B96 161 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 CCDC74BQ96LY2 380 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 SLC38A3Q99624 504 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 TIMM29Q9BSF4 260 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.63■■□□□ 1.538e-15■■■□□ 14.8
HMGN1-217ENST00000489072 DNAJC16Q9Y2G8 782 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 PCDHGA7Q9Y5G6 932 aa24.63■■□□□ 1.53
HMGN1-217ENST00000489072 KIR2DS5A0A0G2JLQ3 304 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 A0A0G2JNG1 304 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 KIR2DS3K7RE56 304 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 STX7O15400 261 aaKnown RBP24.62■■□□□ 1.53
HMGN1-217ENST00000489072 KLK10O43240 276 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 PPFIA2O75334 1257 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 SLC2A4P14672 509 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 LIMK2P53671 638 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 GDF10P55107 478 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 GPLD1P80108 840 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 KIR2DS5Q14953 304 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 TAF1AQ15573 450 aaPredicted RBP24.62■■□□□ 1.53
HMGN1-217ENST00000489072 SLC9B2Q86UD5 537 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 JAMLQ86YT9 394 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 OR4D9Q8NGE8 314 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 CMKLR1Q99788 373 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 TBL1YQ9BQ87 522 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 DPH1Q9BZG8 443 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 TSGA10Q9BZW7 698 aa24.62■■□□□ 1.53
HMGN1-217ENST00000489072 SMG1Q96Q15 3661 aaKnown RBP24.62■■□□□ 1.53
HMGN1-217ENST00000489072 ARHGAP6O43182 974 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 ZNF189O75820 626 aaPredicted RBP24.61■■□□□ 1.53
HMGN1-217ENST00000489072 METTL18O95568 372 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 LPOP22079 712 aaPredicted RBP24.61■■□□□ 1.53
HMGN1-217ENST00000489072 MPSTP25325 297 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 UBE2IP63279 158 aaKnown RBP24.61■■□□□ 1.53
HMGN1-217ENST00000489072 GPRC6AQ5T6X5 926 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 TRAPPC5Q8IUR0 188 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 RASGEF1AQ8N9B8 481 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 DDHD1Q8NEL9 900 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 OR4K2Q8NGD2 314 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 FCRL3Q96P31 734 aaPredicted RBP24.61■■□□□ 1.53
HMGN1-217ENST00000489072 TMEM121Q9BTD3 319 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 CPNE7Q9UBL6 633 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 SSUH2Q9Y2M2 353 aa24.61■■□□□ 1.53
HMGN1-217ENST00000489072 OR5K4A6NMS3 321 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 C2orf81A6NN90 581 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 KRT86O43790 486 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 THRAP10827 490 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 CCL4P13236 92 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 CTSCP53634 463 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 ITGA9Q13797 1035 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 GTF2H3Q13889 308 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 LDLRAP1Q5SW96 308 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 KCTD11Q693B1 232 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 ARHGEF18Q6ZSZ5 1173 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 OR10G6Q8NH81 332 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 BRSK1Q8TDC3 778 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 ATG4AQ8WYN0 398 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 PPP1R2P1Q96PQ5 205 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 STN1Q9H668 368 aaKnown RBP24.6■■□□□ 1.53
HMGN1-217ENST00000489072 ARNT2Q9HBZ2 717 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 SMOXQ9NWM0 555 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 FKBPLQ9UIM3 349 aa24.6■■□□□ 1.53
HMGN1-217ENST00000489072 HGSO14964 777 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 PRAMEF1O95521 474 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 BRAFP15056 766 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 MAPK10P53779 464 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 CLN3Q13286 438 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 SEPT7Q16181 437 aaKnown RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 PARP6Q2NL67 630 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 SOWAHCQ53LP3 525 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 TMEM71Q6P5X7 295 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 OR13C4Q8NGS5 318 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 ZNF398Q8TD17 642 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 USP7Q93009 1102 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 SH3KBP1Q96B97 665 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 CCDC97Q96F63 343 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 AHCYL2Q96HN2 611 aaKnown RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 TTC25Q96NG3 672 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 BBC3Q96PG8 261 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 DPYSL5Q9BPU6 564 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 CPNE5Q9HCH3 593 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 ZNF624Q9P2J8 865 aaPredicted RBP24.59■■□□□ 1.53
HMGN1-217ENST00000489072 ACSL6Q9UKU0 697 aa24.59■■□□□ 1.53
HMGN1-217ENST00000489072 PRAMEF33A0A0G2JMD5 474 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms