RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 OR4L1Q8NH43 312 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 RFWD2Q8NHY2 731 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 FBXO27Q8NI29 283 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 RHEBL1Q8TAI7 183 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 HDAC10Q969S8 669 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.61□□□□□ -1.35
PDCD4-209ENST00000489049 OTUB2Q96DC9 234 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 PTCD3Q96EY7 689 aaKnown RBP6.61□□□□□ -1.35
PDCD4-209ENST00000489049 ZNF419Q96HQ0 510 aaPredicted RBP6.61□□□□□ -1.35
PDCD4-209ENST00000489049 ELMO2Q96JJ3 720 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 SCYL1Q96KG9 808 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 UBXN10Q96LJ8 280 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 FEM1AQ9BSK4 669 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 ZBP1Q9H171 429 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 CCDC68Q9H2F9 335 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 TRIT1Q9H3H1 467 aaKnown RBP6.61□□□□□ -1.35
PDCD4-209ENST00000489049 MAGEE1Q9HCI5 957 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 ALG13Q9NP73 1137 aaKnown RBP6.61□□□□□ -1.35
PDCD4-209ENST00000489049 CATSPERZQ9NTU4 200 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 PIH1D1Q9NWS0 290 aaKnown RBP6.61□□□□□ -1.35
PDCD4-209ENST00000489049 NDE1Q9NXR1 346 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 TAGLN3Q9UI15 199 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 DNAJC16Q9Y2G8 782 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 COL4A6Q14031 1691 aa6.61□□□□□ -1.35
PDCD4-209ENST00000489049 CHD5Q8TDI0 1954 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SHROOM3Q8TF72 1996 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 LTBP2Q14767 1821 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SYCE1LA8MT33 242 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CAPN14A8MX76 684 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ANKRD66B4E2M5 251 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ANKRD65E5RJM6 399 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SPECC1L-ADORA2AF8WAN1 911 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CBX4O00257 560 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ETV2O00321 342 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SLC9A3R1O14745 358 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TEX28O15482 410 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 GYG2O15488 501 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SMIM24O75264 130 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ZMPSTE24O75844 475 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 GJB5O95377 273 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CXCL14O95715 111 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 PRKCGP05129 697 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RB1P06400 928 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TPBGLP0DKB5 382 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 T-ENOLP0DO92 83 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SRFP11831 508 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RPL17P18621 184 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 GABRB3P28472 473 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SERPINB3P29508 390 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 NUMBP49757 651 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ZNF140P52738 457 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 EPHA5P54756 1037 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TAS2R39P59534 338 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RPS24P62847 133 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 OVGP1Q12889 678 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CDH18Q13634 790 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ITGA9Q13797 1035 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 HERC3Q15034 1050 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CXorf57Q6NSI4 855 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 METTL2BQ6P1Q9 378 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RFWD3Q6PCD5 774 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TTC23LQ6PF05 361 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 NCEH1Q6PIU2 408 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 EPGNQ6UW88 154 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TTLL10Q6ZVT0 673 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CMC1Q7Z7K0 106 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 NKAPQ8N5F7 415 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SLC25A41Q8N5S1 370 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 OR13J1Q8NGT2 312 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 FIBINQ8TAL6 211 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 VWCEQ96DN2 955 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 PDLIM5Q96HC4 596 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CDKN2AIPNLQ96HQ2 116 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ZNF778Q96MU6 729 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 GPR78Q96P69 363 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 KLHL5Q96PQ7 755 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TUBGCP5Q96RT8 1024 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RAD9AQ99638 391 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CCT7Q99832 543 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 OMDQ99983 421 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TBC1D10AQ9BXI6 508 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TDRD1Q9BXT4 1180 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 SLC2A11Q9BYW1 496 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RNF32Q9H0A6 362 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 CDH19Q9H159 772 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TFB2MQ9H5Q4 396 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 MRPL40Q9NQ50 206 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TMEM45AQ9NWC5 275 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TAS2R13Q9NYV9 303 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 TBC1D14Q9P2M4 693 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 DNMT3BQ9UBC3 853 aaKnown RBP6.6□□□□□ -1.35
PDCD4-209ENST00000489049 BCAP29Q9UHQ4 241 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 RAPGEFL1Q9UHV5 662 aa6.6□□□□□ -1.35
PDCD4-209ENST00000489049 VPS28Q9UK41 221 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms