RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PMS2P5A8MQ11 134 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 DAB1O75553 588 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 CCNDBP1O95273 360 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 PRSS1P07477 247 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 RARGP13631 454 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 ANXA7P20073 488 aaKnown RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 HRH2P25021 359 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 PSMA4P25789 261 aaKnown RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 NFKBIAP25963 317 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 MAPK4P31152 587 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 PIK3CAP42336 1068 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 EIF4A2Q14240 407 aaKnown RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 KRT32Q14532 448 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 ASTE1Q2TB18 679 aaPredicted RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 WDR38Q5JTN6 314 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 CCNYL2Q5T2Q4 361 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 GKAP1Q5VSY0 366 aaPredicted RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 CCDC190Q86UF4 302 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 GBGT1Q8N5D6 347 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 UCMAQ8WVF2 138 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 FCAMRQ8WWV6 532 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 DNAAF4Q8WXU2 420 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 FBXO17Q96EF6 278 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 OXNAD1Q96HP4 312 aaPredicted RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 C17orf77Q96MU5 243 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 SEMA3CQ99985 751 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 SLX1AQ9BQ83 275 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 UNC45AQ9H3U1 944 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 UPF2Q9HAU5 1272 aaKnown RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 DDX43Q9NXZ2 648 aaKnown RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 EHD2Q9NZN4 543 aa3.45□□□□□ -1.86
RFC4-213ENST00000489028 CORO1CQ9ULV4 474 aaPredicted RBP3.45□□□□□ -1.86
RFC4-213ENST00000489028 A8MZ25 164 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 SMAD9O15198 467 aaKnown RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 ZNF217O75362 1048 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 RNASEH2AO75792 299 aaKnown RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 MBD4O95243 580 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 APOHP02749 345 aaPredicted RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 PATE4P0C8F1 98 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 LAMP2P13473 410 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 CSF2RAP15509 400 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 ZNF23P17027 643 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 MCCP23508 829 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 MAN1A1P33908 653 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 GPR143P51810 404 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 TERF1P54274 439 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 CD81P60033 236 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 MBTD1Q05BQ5 628 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 ACVR2BQ13705 512 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 HAUS3Q68CZ6 603 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 SLC35E4Q6ICL7 350 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 CCDC70Q6NSX1 233 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 PLEKHM3Q6ZWE6 761 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 FOXP4Q8IVH2 680 aaPredicted RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 CEP97Q8IW35 865 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 SLC5A8Q8N695 610 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 GCSAMQ8N6F7 178 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 EMC1Q8N766 993 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 PDILTQ8N807 584 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 OR10V1Q8NGI7 309 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 GRAPLQ8TC17 118 aaPredicted RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 EVI5LQ96CN4 794 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 OR2A14Q96R47 310 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 F2RL3Q96RI0 385 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 GAD1Q99259 594 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 MBNL1Q9NR56 388 aaKnown RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 FAM118AQ9NWS6 357 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 MAP3K20Q9NYL2 800 aaKnown RBP3.44□□□□□ -1.86
RFC4-213ENST00000489028 TSPYL4Q9UJ04 414 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 KIAA1210Q9ULL0 1709 aa3.44□□□□□ -1.86
RFC4-213ENST00000489028 TDRD9Q8NDG6 1382 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 A0A0G2JNG1 304 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 A0A1W2PPI3 338 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 FRMD3A2A2Y4 597 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 TMEM8BA6NDV4 472 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 SCAMP1O15126 338 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 OGG1O15527 345 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 EDIL3O43854 480 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 SYNCRIPO60506 623 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 PDE9AO76083 593 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 OR2C1O95371 312 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 DDX58O95786 925 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 CGAP01215 116 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 CDH2P19022 906 aaPredicted RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 NR2F2P24468 414 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 NR0B1P51843 470 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 ATP12AP54707 1039 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 MVPQ14764 893 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 KIR2DS3Q14952 304 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 KIR2DS5Q14953 304 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 TECRLQ5HYJ1 363 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 CEP85LQ5SZL2 805 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 ACSM2BQ68CK6 577 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 KIAA0930Q6ICG6 404 aaPredicted RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 JADE1Q6IE81 842 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 CEACAM20Q6UY09 585 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 WDTC1Q8N5D0 677 aa3.43□□□□□ -1.86
RFC4-213ENST00000489028 C1orf52Q8N6N3 182 aaKnown RBP3.43□□□□□ -1.86
RFC4-213ENST00000489028 ANKRD52Q8NB46 1076 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms