RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 OGFOD3Q6PK18 319 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 GLRX5Q86SX6 157 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 TMEM135Q86UB9 458 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 FAM181AQ8N9Y4 354 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 BBOF1Q8ND07 529 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 FAM46DQ8NEK8 389 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 NAT14Q8WUY8 206 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 HEXDCQ8WVB3 486 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 SCG3Q8WXD2 468 aaKnown RBP14.96□□□□□ -0.01
FDPS-213ENST00000489003 SGF29Q96ES7 293 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 SGSM3Q96HU1 749 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 COPS8Q99627 209 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 WHRNQ9P202 907 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 SLC23A2Q9UGH3 650 aa14.96□□□□□ -0.01
FDPS-213ENST00000489003 COL5A1P20908 1838 aaPredicted RBP14.96□□□□□ -0.01
FDPS-213ENST00000489003 CNOT1A5YKK6 2376 aaKnown RBP14.96□□□□□ -0.02
FDPS-213ENST00000489003 SPTBN4Q9H254 2564 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 CTAGE15A4D2H0 777 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 KMOO15229 486 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 TNFSF14O43557 240 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 SGTAO43765 313 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 BANF1O75531 89 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 VAPBO95292 243 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 ZNF7P17097 686 aaPredicted RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 ACRV1P26436 265 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 AKT1P31749 480 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 ACTR1BP42025 376 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 ARCN1P48444 511 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 DRG2P55039 364 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 ACTR1AP61163 376 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 PRAMEP78395 509 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 SLC7A5Q01650 507 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 DHX9Q08211 1270 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 ILF3Q12906 894 aaKnown RBP eCLIP14.95□□□□□ -0.024e-8■■■□□ 18.4
FDPS-213ENST00000489003 SEMA3AQ14563 771 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 DBN1Q16643 649 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 FASTKD1Q53R41 847 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 C6orf132Q5T0Z8 1188 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 ZCCHC8Q6NZY4 707 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 AFTPHQ6ULP2 937 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 CRTC3Q6UUV7 619 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 C11orf96Q7Z7L8 435 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 CTAGE6Q86UF2 777 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 LRRTM4Q86VH4 590 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 IGDCC3Q8IVU1 814 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 SFTPA2Q8IWL1 248 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 NOA1Q8NC60 698 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 BOCQ9BWV1 1114 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 GRHL1Q9NZI5 618 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 TAAR2Q9P1P5 351 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 SAMD15Q9P1V8 674 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 FTSJ1Q9UET6 329 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 GPR34Q9UPC5 381 aa14.95□□□□□ -0.02
FDPS-213ENST00000489003 UTP11Q9Y3A2 253 aaKnown RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 DNMT3AQ9Y6K1 912 aaPredicted RBP14.95□□□□□ -0.02
FDPS-213ENST00000489003 PIKFYVEQ9Y2I7 2098 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 IGLV3-16A0A075B6K0 115 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 LY6G6EA0A0G2JKS1 128 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 ZCWPW2A0A1B0GU75 182 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 OR2AG2A6NM03 316 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 NDC80O14777 642 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 CD3EAPO15446 510 aaKnown RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 POP7O75817 140 aaKnown RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 ACP5P13686 325 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 ATP1B2P14415 290 aaPredicted RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 CKMT2P17540 419 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 ARNTP27540 789 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 CLCNKAP51800 687 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 CBLBQ13191 982 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 DNAJC3Q13217 504 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 LRP8Q14114 963 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 BBS9Q3SYG4 887 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 HP1BP3Q5SSJ5 553 aaPredicted RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 C8orf74Q6P047 294 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 SLC30A9Q6PML9 568 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 DET1Q7L5Y6 550 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 LDB1Q86U70 411 aaPredicted RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 SLCO6A1Q86UG4 719 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 PDIK1LQ8N165 341 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 CEP112Q8N8E3 955 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 ART4Q93070 314 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 ZNF669Q96BR6 464 aaPredicted RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 STAMBPL1Q96FJ0 436 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 DCUN1D1Q96GG9 259 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 EBNA1BP2Q99848 306 aaKnown RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 CARD6Q9BX69 1037 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 ZCCHC2Q9C0B9 1178 aaKnown RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 RAB17Q9H0T7 212 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 DPEP2Q9H4A9 486 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 KLC4Q9NSK0 619 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 MARCH4Q9P2E8 410 aaPredicted RBP14.94□□□□□ -0.02
FDPS-213ENST00000489003 GULP1Q9UBP9 304 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 KCNK6Q9Y257 313 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 MAD1L1Q9Y6D9 718 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 PRSS21Q9Y6M0 314 aa14.94□□□□□ -0.02
FDPS-213ENST00000489003 RPS6KL1Q9Y6S9 549 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms