RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 HSPB7Q9UBY9 170 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 EPHA6Q9UF33 1036 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 FEM1BQ9UK73 627 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 B9A039 149 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 CSPG5O95196 566 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 DUS4LO95620 317 aaKnown RBP2.28□□□□□ -2.04
CCDC93-209ENST00000488908 NGFP01138 241 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 LIPFP07098 398 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 KRT19P08727 400 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 HOXB5P09067 269 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 UGT1A4P22310 534 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 HNF4AP41235 474 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 LIMK2P53671 638 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 SP3Q02447 781 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 ELAVL2Q12926 359 aaKnown RBP2.28□□□□□ -2.04
CCDC93-209ENST00000488908 PRKG1Q13976 671 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 TEAD2Q15562 447 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 ANKRD45Q5TZF3 282 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 FAM198BQ6UWH4 519 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.28□□□□□ -2.04
CCDC93-209ENST00000488908 MOGAT3Q86VF5 341 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 SUGP1Q8IWZ8 645 aaKnown RBP2.28□□□□□ -2.04
CCDC93-209ENST00000488908 FTSJ3Q8IY81 847 aaKnown RBP2.28□□□□□ -2.04
CCDC93-209ENST00000488908 RASL10AQ92737 203 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 RILPL2Q969X0 211 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 ELP4Q96EB1 424 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 SOSTQ9BQB4 213 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 PCGF1Q9BSM1 259 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 FAM167BQ9BTA0 163 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 GPR83Q9NYM4 423 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 PTTG2Q9NZH5 202 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 COQ3Q9NZJ6 369 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 KLHL9Q9P2J3 617 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 LRWD1Q9UFC0 647 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 RABGAP1Q9Y3P9 1069 aa2.28□□□□□ -2.04
CCDC93-209ENST00000488908 KPNA7A9QM74 516 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PLK4O00444 970 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 IRAK2O43187 625 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 BCL2L11O43521 198 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 NBNO60934 754 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PARNO95453 639 aaKnown RBP2.27□□□□□ -2.05
CCDC93-209ENST00000488908 URODP06132 367 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 SERPINB3P29508 390 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 HOXC9P31274 260 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 DLK1P80370 383 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 HNRNPDQ14103 355 aaKnown RBP2.27□□□□□ -2.05
CCDC93-209ENST00000488908 SGSM1Q2NKQ1 1148 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 TOGARAM2Q6ZUX3 1019 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 Q75L30 129 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 DPPA4Q7L190 304 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 RRM2BQ7LG56 351 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 SLC34A3Q8N130 599 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 GBGT1Q8N5D6 347 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 TMEM178AQ8NBL3 297 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 OR2T12Q8NG77 320 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 UTP15Q8TED0 518 aaKnown RBP2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PPP4R1Q8TF05 950 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 TRAPPC12Q8WVT3 735 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PABPC5Q96DU9 382 aaKnown RBP2.27□□□□□ -2.05
CCDC93-209ENST00000488908 COG8Q96MW5 612 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 SLX1AQ9BQ83 275 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 TMEM47Q9BQJ4 181 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 TRAF4Q9BUZ4 470 aaPredicted RBP2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PHF7Q9BWX1 381 aaPredicted RBP2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PCGF6Q9BYE7 350 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 SLC25A18Q9H1K4 315 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 P2RY12Q9H244 342 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 LTB4R2Q9NPC1 389 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 A4GNTQ9UNA3 340 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 CELA1Q9UNI1 258 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 SCINQ9Y6U3 715 aa2.27□□□□□ -2.05
CCDC93-209ENST00000488908 PRAG1Q86YV5 1406 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 C15orf62A8K5M9 175 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 M0QZ24 198 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 ACADMP11310 421 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 EPHA2P29317 976 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 RRS1Q15050 365 aaKnown RBP2.26□□□□□ -2.05
CCDC93-209ENST00000488908 WDR45BQ5MNZ6 344 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 RAPH1Q70E73 1250 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 C2CD5Q86YS7 1000 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 HPS6Q86YV9 775 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 PAF1Q8N7H5 531 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 Q8N7P7 452 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 SLC47A1Q96FL8 570 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 ACOX2Q99424 681 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 RPP25Q9BUL9 199 aaKnown RBP2.26□□□□□ -2.05
CCDC93-209ENST00000488908 UPF3AQ9H1J1 476 aaKnown RBP2.26□□□□□ -2.05
CCDC93-209ENST00000488908 ABCB10Q9NRK6 738 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 HCN3Q9P1Z3 774 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 ZDHHC2Q9UIJ5 367 aa2.26□□□□□ -2.05
CCDC93-209ENST00000488908 AAR2Q9Y312 384 aaKnown RBP2.26□□□□□ -2.05
CCDC93-209ENST00000488908 IGHV4-61A0A0C4DH41 118 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 TTC36A6NLP5 189 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 USP17L23D6RBM5 183 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 GPR137BO60478 399 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 GUCY1B2O75343 617 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 WISP2O76076 250 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 MLYCDO95822 493 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 IGHV4-59P01825 116 aa2.25□□□□□ -2.05
CCDC93-209ENST00000488908 UBA1P22314 1058 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms