RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 KMOO15229 486 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 MTX2O75431 263 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 UBXN7O94888 489 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 ZNF7P17097 686 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-231ENST00000488905 TYRP1P17643 537 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 SLC19A1P41440 591 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 MC1RQ01726 317 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 CDK18Q07002 472 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 ASTE1Q2TB18 679 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-231ENST00000488905 NPNTQ6UXI9 565 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 TGM7Q96PF1 710 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 ULBP3Q9BZM4 244 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 DEF6Q9H4E7 631 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 POT1Q9NUX5 634 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 ZNF624Q9P2J8 865 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-231ENST00000488905 DNAJC16Q9Y2G8 782 aa18.14■□□□□ 0.49
HDAC6-231ENST00000488905 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.14■□□□□ 0.491e-7■■■□□ 15.2
HDAC6-231ENST00000488905 TOX3O15405 576 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-231ENST00000488905 VEGFDO43915 354 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 MT-CYBP00156 380 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-231ENST00000488905 BPIP17213 487 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 CAPZBP47756 277 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 FOXM1Q08050 763 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 SKIDA1Q1XH10 827 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 KHDC1Q4VXA5 237 aaKnown RBP18.13■□□□□ 0.49
HDAC6-231ENST00000488905 CRTC2Q53ET0 693 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-231ENST00000488905 ATP1A1-AS1Q5TC04 95 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 ZNF547Q8IVP9 402 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 VPS35Q96QK1 796 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 ZNF768Q9H5H4 540 aaKnown RBP18.13■□□□□ 0.49
HDAC6-231ENST00000488905 SLC30A1Q9Y6M5 507 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 RPS6KL1Q9Y6S9 549 aa18.13■□□□□ 0.49
HDAC6-231ENST00000488905 SSU72P8A0A1W2PR75 194 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 NDST3O95803 873 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 KRT1P04264 644 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 BRAFP15056 766 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 ZFXP17010 805 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-231ENST00000488905 ZNF28P17035 718 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 AMD1P17707 334 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 TCN2P20062 427 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 CASRP41180 1078 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 SEPHS1P49903 392 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 DEFB109BQ30KR1 87 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 SPATA22Q8NHS9 363 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 SLC35G2Q8TBE7 412 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 APOBEC4Q8WW27 367 aaKnown RBP18.12■□□□□ 0.49
HDAC6-231ENST00000488905 RSC1A1Q92681 617 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 DNAJC7Q99615 494 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 MAK16Q9BXY0 300 aaKnown RBP18.12■□□□□ 0.49
HDAC6-231ENST00000488905 XPO4Q9C0E2 1151 aaKnown RBP18.12■□□□□ 0.49
HDAC6-231ENST00000488905 ANAPC2Q9UJX6 822 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 SPO11Q9Y5K1 396 aa18.12■□□□□ 0.49
HDAC6-231ENST00000488905 MRPS18BQ9Y676 258 aaKnown RBP18.12■□□□□ 0.49
HDAC6-231ENST00000488905 A0A0A6YYK5 440 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-231ENST00000488905 OR52A4PA6NMU1 304 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 AURKAO14965 403 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 RASSF9O75901 435 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 CDK14O94921 469 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 TPM3P06753 285 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 RPL10P27635 214 aaKnown RBP18.11■□□□□ 0.49
HDAC6-231ENST00000488905 ARHGAP25P42331 645 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 LEPRP48357 1165 aaKnown RBP18.11■□□□□ 0.49
HDAC6-231ENST00000488905 DYNLT1P63172 113 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 SH3BP2P78314 561 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 GPR18Q14330 331 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 AGAP9Q5VTM2 703 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 C16orf46Q6P387 395 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 ABRAXAS1Q6UWZ7 409 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 WASH2PQ6VEQ5 465 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 PRSS42Q7Z5A4 293 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 RFX6Q8HWS3 928 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 TRAPPC5Q8IUR0 188 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 RBM12BQ8IXT5 1001 aaKnown RBP18.11■□□□□ 0.49
HDAC6-231ENST00000488905 RNF31Q96EP0 1072 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 OR6C1Q96RD1 312 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 SRPK1Q96SB4 655 aaKnown RBP18.11■□□□□ 0.49
HDAC6-231ENST00000488905 GLOD4Q9HC38 313 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 WASH6PQ9NQA3 447 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 ZNF71Q9NQZ8 489 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-231ENST00000488905 CROTQ9UKG9 612 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 TMPRSS11EQ9UL52 423 aa18.11■□□□□ 0.49
HDAC6-231ENST00000488905 AKR1B10O60218 316 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 PMPCBO75439 489 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 F8A1P23610 371 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 DLSTP36957 453 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 DRG2P55039 364 aaKnown RBP18.1■□□□□ 0.49
HDAC6-231ENST00000488905 TRIM14Q14142 442 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 IL11RAQ14626 422 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 ATP13A5Q4VNC0 1218 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 LRRC38Q5VT99 294 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 C6orf15Q6UXA7 325 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-231ENST00000488905 B4GALNT4Q76KP1 1039 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 C11orf96Q7Z7L8 435 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 RHOT2Q8IXI1 618 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 OR8K1Q8NGG5 319 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 CXorf40BQ96DE9 158 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 STAMBPL1Q96FJ0 436 aa18.1■□□□□ 0.49
HDAC6-231ENST00000488905 BPIFA1Q9NP55 256 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms