RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 DBN1Q16643 649 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 SPANXN3Q5MJ09 141 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 CDHR3Q6ZTQ4 885 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 RAVER1Q8IY67 606 aaKnown RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 OR13C4Q8NGS5 318 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 RAB3IL1Q8TBN0 382 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 TSSK1BQ9BXA7 367 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ARRDC1-AS1Q9H2J1 176 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 AASDHPPTQ9NRN7 309 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 MROH6A6NGR9 719 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 C2orf81A6NN90 581 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 UNC5CO95185 931 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 LMNAP02545 664 aaKnown RBP19.19■□□□□ 0.66
CCM2-216ENST00000488727 WNT1P04628 370 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 PCCBP05166 539 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 BMPR2Q13873 1038 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 CCDC6Q16204 474 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 ESRP1Q6NXG1 681 aaKnown RBP19.19■□□□□ 0.66
CCM2-216ENST00000488727 PARP9Q8IXQ6 854 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 NRSN1Q8IZ57 195 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 OR4K2Q8NGD2 314 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 AP2M1Q96CW1 435 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 LRRC37BQ96QE4 947 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 RANBP9Q96S59 729 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 AGAP2Q99490 1192 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 RIOK2Q9BVS4 552 aaKnown RBP19.19■□□□□ 0.66
CCM2-216ENST00000488727 SYBUQ9NX95 663 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 BFARQ9NZS9 450 aa19.19■□□□□ 0.66
CCM2-216ENST00000488727 A0A1W2PR77 199 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 CCDC78A2IDD5 438 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 PATE3B3GLJ2 98 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 PROB1E7EW31 1015 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 AP3B1O00203 1094 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 SOD1P00441 154 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 MPLP40238 635 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 NPY2RP49146 381 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 DPTQ07507 201 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 HENMT1Q5T8I9 393 aaKnown RBP19.18■□□□□ 0.66
CCM2-216ENST00000488727 CASC4Q6P4E1 433 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 ZNF765Q7L2R6 523 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 ABI3BPQ7Z7G0 1075 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 ERP27Q96DN0 273 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 ZNF778Q96MU6 729 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 IL22Q9GZX6 179 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 FAM83DQ9H4H8 585 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 NFKBIL1Q9UBC1 381 aaPredicted RBP19.18■□□□□ 0.66
CCM2-216ENST00000488727 PKP3Q9Y446 797 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 TCAF1Q9Y4C2 921 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 PCDHGA5Q9Y5G8 931 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 HS3ST3A1Q9Y663 406 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 OTOGLQ3ZCN5 2332 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 WDR87Q6ZQQ6 2873 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 CACNA1EQ15878 2313 aa19.18■□□□□ 0.66
CCM2-216ENST00000488727 A0A1B0GTW7 788 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 HEATR9A2RTY3 570 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 RGSL1A5PLK6 1076 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 FPGTO14772 594 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 STX7O15400 261 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 RETP07949 1114 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 CD38P28907 300 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 HOXD12P35452 270 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 CSNK1EP49674 416 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 DCDC1P59894 354 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 RIPK1Q13546 671 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 INPP5AQ14642 412 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 PACS1Q6VY07 963 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 NLRP9Q7RTR0 991 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 KLHL29Q96CT2 875 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 THOC1Q96FV9 657 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 DNAJC1Q96KC8 554 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 TRIM55Q9BYV6 548 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 SMOC1Q9H4F8 434 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 NPHS2Q9NP85 383 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 KCTD5Q9NXV2 234 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 SIRPGQ9P1W8 387 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 SUSD2Q9UGT4 822 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 FNDC3AQ9Y2H6 1198 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 ADAMTS9Q9P2N4 1935 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 CCL22O00626 93 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 GAPDHSO14556 408 aaPredicted RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 BIRC5O15392 142 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 POLBP06746 335 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 GNSP15586 552 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 BGNP21810 368 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 AFF3P51826 1226 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 PFN3P60673 137 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 PDE1BQ01064 536 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 PCID2Q5JVF3 399 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 PLA2G2CQ5R387 149 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 PNCKQ6P2M8 343 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 KYAT3Q6YP21 454 aaKnown RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 TBC1D1Q86TI0 1168 aaPredicted RBP19.17■□□□□ 0.66
CCM2-216ENST00000488727 OR13H1Q8NG92 308 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 MAGEC3Q8TD91 643 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 PLEKHG4BQ96PX9 1271 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 IL26Q9NPH9 171 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 CHRAC1Q9NRG0 131 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 SLC2A6Q9UGQ3 507 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 FKBPLQ9UIM3 349 aa19.17■□□□□ 0.66
CCM2-216ENST00000488727 OR1A2Q9Y585 309 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms