RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ELMO2Q96JJ3 720 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 RAB33BQ9H082 229 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 SLC40A1Q9NP59 571 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 ARFGAP3Q9NP61 516 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 WASH6PQ9NQA3 447 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 EPHA6Q9UF33 1036 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 VPS4AQ9UN37 437 aa18.75■□□□□ 0.59
GGPS1-206ENST00000488594 PIPSLA2A3N6 862 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 VEGFDO43915 354 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 MMP2P08253 660 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 FIGNQ5HY92 759 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 ZNF648Q5T619 568 aaPredicted RBP18.74■□□□□ 0.59
GGPS1-206ENST00000488594 AGAP9Q5VTM2 703 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 CACHD1Q5VU97 1274 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 ALS2CLQ60I27 953 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 CCNYQ8ND76 341 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 EID2BQ96D98 161 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
GGPS1-206ENST00000488594 FCRL4Q96PJ5 515 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 BPIFA3Q9BQP9 254 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 MAGEE1Q9HCI5 957 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 PDE7BQ9NP56 450 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 LHX9Q9NQ69 397 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 SLC23A2Q9UGH3 650 aa18.74■□□□□ 0.59
GGPS1-206ENST00000488594 VCLP18206 1134 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 NELFEP18615 380 aaKnown RBP18.73■□□□□ 0.59
GGPS1-206ENST00000488594 IDSP22304 550 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 GBE1Q04446 702 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 TYRO3Q06418 890 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 SEPT7Q16181 437 aaKnown RBP18.73■□□□□ 0.59
GGPS1-206ENST00000488594 PLA2G4EQ3MJ16 856 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 TMC3Q7Z5M5 1100 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 BPHLQ86WA6 291 aaPredicted RBP18.73■□□□□ 0.59
GGPS1-206ENST00000488594 EFCAB3Q8N7B9 438 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 GALNT11Q8NCW6 608 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 GPR26Q8NDV2 337 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 RSC1A1Q92681 617 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 FAF2Q96CS3 445 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 CXorf40BQ96DE9 158 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 BRD8Q9H0E9 1235 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 DNAJC16Q9Y2G8 782 aa18.73■□□□□ 0.59
GGPS1-206ENST00000488594 USP9XQ93008 2570 aaPredicted RBP18.72■□□□□ 0.59
GGPS1-206ENST00000488594 A0A1B0GTH6 734 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 JCHAINP01591 159 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 BRAFP15056 766 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 IFI35P80217 286 aaPredicted RBP18.72■□□□□ 0.59
GGPS1-206ENST00000488594 SEMA5AQ13591 1074 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 GPR18Q14330 331 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 GALNT3Q14435 633 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 HGSNATQ68CP4 663 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 FAM92BQ6ZTR7 304 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 TMEM135Q86UB9 458 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 CT55Q8WUE5 264 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 THAP4Q8WY91 577 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 UBXN4Q92575 508 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 SYN2Q92777 582 aaPredicted RBP18.72■□□□□ 0.59
GGPS1-206ENST00000488594 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 GPR87Q9BY21 358 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 XPO4Q9C0E2 1151 aaKnown RBP18.72■□□□□ 0.59
GGPS1-206ENST00000488594 SEMA5BQ9P283 1151 aa18.72■□□□□ 0.59
GGPS1-206ENST00000488594 TTLL8A6PVC2 850 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 KCNK1O00180 336 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 KIF1CO43896 1103 aaKnown RBP18.71■□□□□ 0.59
GGPS1-206ENST00000488594 CDK14O94921 469 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 RPL10P27635 214 aaKnown RBP18.71■□□□□ 0.59
GGPS1-206ENST00000488594 GJC1P36383 396 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 PPIDQ08752 370 aaKnown RBP18.71■□□□□ 0.59
GGPS1-206ENST00000488594 TUBB3Q13509 450 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 ATP13A4Q4VNC1 1196 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 FHL5Q5TD97 284 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 IRGCQ6NXR0 463 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 KLHL35Q6PF15 583 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 ZNF547Q8IVP9 402 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 PQLC3Q8N755 202 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 CNTD1Q8N815 330 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 RNF31Q96EP0 1072 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 TRIB3Q96RU7 358 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 SRPK1Q96SB4 655 aaKnown RBP18.71■□□□□ 0.59
GGPS1-206ENST00000488594 ACTL8Q9H568 366 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 DTLQ9NZJ0 730 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 RARRES3Q9UL19 164 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 SHOC2Q9UQ13 582 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 ZNF711Q9Y462 761 aa18.71■□□□□ 0.59
GGPS1-206ENST00000488594 SPTAN1Q13813 2472 aaKnown RBP18.71■□□□□ 0.59
GGPS1-206ENST00000488594 OR52A4PA6NMU1 304 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 KCNJ13O60928 360 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 AGFG2O95081 481 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 HALP42357 657 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 ACY1Q03154 408 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 SLC10A2Q12908 348 aaPredicted RBP18.7■□□□□ 0.58
GGPS1-206ENST00000488594 UGT8Q16880 541 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 CAPRIN2Q6IMN6 1127 aaKnown RBP18.7■□□□□ 0.58
GGPS1-206ENST00000488594 LRRN4Q8WUT4 740 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 SLC41A2Q96JW4 573 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 VPS35Q96QK1 796 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 GPR63Q9BZJ6 419 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 LCMT1Q9UIC8 334 aa18.7■□□□□ 0.58
GGPS1-206ENST00000488594 A0A1W2PQJ5 194 aa18.69■□□□□ 0.58
GGPS1-206ENST00000488594 MTX2O75431 263 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms