RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 LACRTQ9GZZ8 138 aa12.11□□□□□ -0.47
TTC3-221ENST00000488522 ZNF768Q9H5H4 540 aaKnown RBP12.11□□□□□ -0.47
TTC3-221ENST00000488522 CPNE7Q9UBL6 633 aa12.11□□□□□ -0.47
TTC3-221ENST00000488522 ZNHIT2Q9UHR6 403 aa12.11□□□□□ -0.47
TTC3-221ENST00000488522 KCNK6Q9Y257 313 aa12.11□□□□□ -0.47
TTC3-221ENST00000488522 PLAAQ9Y263 795 aa12.11□□□□□ -0.47
TTC3-221ENST00000488522 CENPEQ02224 2701 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 MATN3O15232 486 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 MFSD11O43934 449 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 CLDN7O95471 211 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 ASMTLO95671 621 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 ATP1A1P05023 1023 aaKnown RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 ACP5P13686 325 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 XRCC1P18887 633 aaPredicted RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 CA4P22748 312 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 ARSEP51690 589 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 PMS2P54278 862 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 EPHB1P54762 984 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 HADHBP55084 474 aaKnown RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 DCDC1P59894 354 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 DSC2Q02487 901 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 PAFAH1B3Q15102 231 aaKnown RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 TIGD7Q6NT04 549 aaPredicted RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 KDELC2Q7Z4H8 507 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 PRSS42Q7Z5A4 293 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
TTC3-221ENST00000488522 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 HSPH1Q92598 858 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 PLEKHG4BQ96PX9 1271 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 TBC1D10AQ9BXI6 508 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 FAM83DQ9H4H8 585 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 SEMA5BQ9P283 1151 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 POLHQ9Y253 713 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 PPP2R2CQ9Y2T4 447 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 PRKAB1Q9Y478 270 aa12.1□□□□□ -0.47
TTC3-221ENST00000488522 MACROD2A1Z1Q3 448 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 CHUKO15111 745 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 GRID2O43424 1007 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 KRT86O43790 486 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 PROSCO94903 275 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 FGF5P12034 268 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 ZNF28P17035 718 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 CCNCP24863 283 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 GFERP55789 205 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 MESDQ14696 234 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 IFI16Q16666 785 aaKnown RBP12.09□□□□□ -0.47
TTC3-221ENST00000488522 NCBP2-AS2Q69YL0 99 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 PDPK2PQ6A1A2 396 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 C6orf15Q6UXA7 325 aaPredicted RBP12.09□□□□□ -0.47
TTC3-221ENST00000488522 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 ATCAYQ86WG3 371 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 PHYKPLQ8IUZ5 450 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 KLHL6Q8WZ60 621 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 ULBP3Q9BZM4 244 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 RAB33BQ9H082 229 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 PCDH9Q9HC56 1237 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 PKD2L2Q9NZM6 624 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 EPHA6Q9UF33 1036 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 KCND3Q9UK17 655 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 CROTQ9UKG9 612 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 MRPS18BQ9Y676 258 aaKnown RBP12.09□□□□□ -0.47
TTC3-221ENST00000488522 DUSP10Q9Y6W6 482 aa12.09□□□□□ -0.47
TTC3-221ENST00000488522 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 A0A0U1RQJ8 604 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 C1orf232A0A0U1RR37 186 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 K7EM74 188 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 MTSS1O43312 755 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 RFPL1O75677 317 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 HLA-DQB2P05538 268 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 FURINP09958 794 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 ZNF8P17098 575 aaPredicted RBP12.08□□□□□ -0.48
TTC3-221ENST00000488522 DLSTP36957 453 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 SSR1P43307 286 aaKnown RBP12.08□□□□□ -0.48
TTC3-221ENST00000488522 NIPAL4Q0D2K0 466 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 QPCTQ16769 361 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
TTC3-221ENST00000488522 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 C16orf46Q6P387 395 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 ABRAXAS1Q6UWZ7 409 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 WASH2PQ6VEQ5 465 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 RBM12BQ8IXT5 1001 aaKnown RBP12.08□□□□□ -0.48
TTC3-221ENST00000488522 FAF2Q96CS3 445 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 ZNF670Q9BS34 389 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 BRD8Q9H0E9 1235 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 LZTFL1Q9NQ48 299 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 WASH6PQ9NQA3 447 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 PRDM8Q9NQV8 689 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 POT1Q9NUX5 634 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 SCHIP1Q9P0W5 487 aaPredicted RBP12.08□□□□□ -0.48
TTC3-221ENST00000488522 ZNF624Q9P2J8 865 aaPredicted RBP12.08□□□□□ -0.48
TTC3-221ENST00000488522 ATXN10Q9UBB4 475 aa12.08□□□□□ -0.48
TTC3-221ENST00000488522 KLHL3Q9UH77 587 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms