RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 STMND1H3BQB6 276 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 KIR2DS3K7RE56 304 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ZW10O43264 779 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SNX2O60749 519 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ZRANB2O95218 330 aaKnown RBP eCLIP11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SLC2A4P14672 509 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 HLA-DPA1P20036 260 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 RBL1P28749 1068 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 PTPN7P35236 360 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CYLC1P35663 651 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 TSPAN7P41732 249 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GFERP55789 205 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 C19orf57Q0VDD7 668 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 OLIG2Q13516 323 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 KIR2DS5Q14953 304 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 INSCQ1MX18 579 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 TAF1BQ53T94 588 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GLT6D1Q7Z4J2 308 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ARHGAP22Q7Z5H3 698 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 LRRTM4Q86VH4 590 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 RCOR2Q8IZ40 523 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ACRBPQ8NEB7 543 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 DDHD1Q8NEL9 900 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 COL26A1Q96A83 441 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 VAT1Q99536 393 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 HEMGNQ9BXL5 484 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ZMYND15Q9H091 742 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 IL26Q9NPH9 171 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SIDT1Q9NXL6 827 aaKnown RBP11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ZNF624Q9P2J8 865 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 DNAJC16Q9Y2G8 782 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 FER1L5A0AVI2 2057 aa11.05□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GRID2IPA4D2P6 1211 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 EFCAB7A8K855 629 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 BTNL10A8MVZ5 291 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 KMOO15229 486 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 VEGFDO43915 354 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 EPOP01588 193 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 PLA2G2AP14555 144 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ZNF7P17097 686 aaPredicted RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 UGT1A3P35503 534 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SPAM1P38567 509 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SLC19A1P41440 591 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 MAPK9P45984 424 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 OTUD4Q01804 1114 aaKnown RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 MPP3Q13368 585 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 XRCC4Q13426 336 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SPA17Q15506 151 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SEPT7Q16181 437 aaKnown RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 MANEAQ5SRI9 462 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ANKS6Q68DC2 871 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 AADACL2Q6P093 401 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 XKR5Q6UX68 686 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 FAM151BQ6UXP7 276 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SLC9B2Q86UD5 537 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 FAM129CQ86XR2 697 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 TRAPPC5Q8IUR0 188 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SLC25A41Q8N5S1 370 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GPR150Q8NGU9 434 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ACTL9Q8TC94 416 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 DTX3LQ8TDB6 740 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 BLOC1S5Q8TDH9 187 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 JPH3Q8WXH2 748 aaPredicted RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 NKD1Q969G9 470 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SGF29Q96ES7 293 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 AHCYL2Q96HN2 611 aaKnown RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 TAAR9Q96RI9 348 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SRPK1Q96SB4 655 aaKnown RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 FAM118BQ9BPY3 351 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 TRABDQ9H4I3 376 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 STN1Q9H668 368 aaKnown RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 UCK1Q9HA47 277 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SMOXQ9NWM0 555 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 HACD3Q9P035 362 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 AKAP7Q9P0M2 348 aaPredicted RBP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 PCDHA3Q9Y5H8 950 aa11.04□□□□□ -0.64
RAB11FIP3-210ENST00000487899 COL12A1Q99715 3063 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 SPTA1P02549 2419 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 GLYATL1P3A0A0U1RQE8 302 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 A0A0U1RQJ8 604 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 MACROD2A1Z1Q3 448 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 OR5K4A6NMS3 321 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 OR52A4PA6NMU1 304 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 A8MU76 341 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 PDZK1P1A8MUH7 402 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 BUD23O43709 281 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CDK14O94921 469 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ANKRD34CP0C6C1 535 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 XRCC1P18887 633 aaPredicted RBP11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CTNNA2P26232 953 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 RPL10P27635 214 aaKnown RBP11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 PSMB4P28070 264 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CSTF2P33240 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 ADRA1AP35348 466 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CAPZBP47756 277 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 CTSCP53634 463 aa11.03□□□□□ -0.64
RAB11FIP3-210ENST00000487899 RAB15P59190 212 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms